Oncorhynchus tshawytscha (Chinook salmon): 112216020
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Entry
112216020 CDS
T05605
Symbol
phf20b
Name
(RefSeq) PHD finger protein 20b isoform X1
KO
K18402
PHD finger protein 20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112216020 (phf20b)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
112216020 (phf20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
MBT
PHD
SH3_Hsr9
DUF4537
Tudor_2
Chromo_MORC2_6th
Ureidogly_lyase
HSBP1
Motif
Other DBs
NCBI-GeneID:
112216020
NCBI-ProteinID:
XP_024231363
LinkDB
All DBs
Position
LG16:59308651..59329977
Genome browser
AA seq
992 aa
AA seq
DB search
MMTKTPPDRRGITFEVGAQLEARDNLKNWYQASIEKIDYEDEKVLIHYRQWSHRYDEWFD
WTSPYLRPLDRIQLRKEGLQDKRPSSVFRVNEKVLACWVDCHYYPAKVLEVKRDASYTVK
FFDGVVKTLKPNKVKPYKENGKARERDRTQREQSSGKEENRKALSDESKSGSSDLDGESN
GEEKERREDREEKTLNGNFETCGQKGSLNGEKGAGGGKREEPQTKEDGQVVQTKSEDVNV
EGERVMRSTKQQGEKKEECASGQSPQLPRGNRYRPSEESQRELRKRRVSLVQMPPPKRRR
PDTSKDRNSQSQQAGSDSVPVSPALTPDQTNPQTPTDAGIEAPSDIESILKRQVHLPTTH
KYSREPLYRVIKNQPPPILSIELDHNPFKCKAPGCLKSFRKASLLHYHVKYYHADSEHAS
EGSMQTRASEKQVGSQETPRRRRTMSGSIHSPLGDRQAANGMNRHRRRSPSEKRKENQQT
NSRPHEEREWSASEMGEKIRGKTERDFLLNKQKKRKKTGRSKSENTNGEENMGISLFNST
QSNLVSKFSLLHKHKLSYDSSPEHITDQVQEDDESDWSTVSAEWSDEYMEAELDVTTPVS
EQNVSMVTKGSDTVRCVCEVEEENDFMIQCDECLCWQHGTCMGLFEHNVPDTYSCYICRD
PPAQRPSQRYWYDRDWLSSGHMYGLSFLDENYSHQNRKKLMATHQLLGDVHHVFEVLNGL
QLKMSILQTQTHSDLKLWRQPWKQEEKLGMSCSMATSRTPSPAANDREGGEALKAMSVST
LSEKAKRVQMSPTSFQDSNASYISSEHCYQKPRAYYPAVEQRLVVETRGGSELEDSLRST
ENLLEQEQRYGGPLDPDRAKLYPSSLLQDRAKIHPITLQPDKKLYVGRESEVEVKTEEAE
PSPDIKPDPEKDNVLHQQWQINLLDHIEAMQNQVTHRMDLIEKELDVLESWLDYTGELEP
PDPLTRLPQLKHRIRQMLTDLGTVQQISLCSS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaagactcctcccgacagaagagggatcacctttgaggtgggagcacagctg
gaggctcgcgacaacctgaagaactggtaccaggccagcatagagaagatagactatgag
gacgagaaggttctgatccactaccgtcagtggagccaccgctatgacgagtggtttgac
tggaccagcccatacctgaggcccctggacaggatccagttgaggaaagagggtctgcag
gacaaacggcccagctcggtgtttcgggtgaatgagaaagtcttggcctgttgggtagac
tgccactactatcctgctaaggttctggaagtcaaaagagatgcttcctacactgtgaag
tttttcgatggagttgtcaagactcttaagccaaacaaagtaaagccatataaagagaat
gggaaagccagggagagggacagaactcaacgtgagcagagcagtgggaaagaggagaac
aggaaagccctgagcgatgaatccaaaagcggctcttcagacctggatggagagagcaac
ggagaggaaaaggagagaagagaagacagagaggaaaaaacgctgaatggcaactttgag
acctgtggacagaaagggagcctaaacggagaaaagggggcaggaggagggaagagagaa
gagccacaaaccaaagaagatgggcaggttgtccaaactaaatcggaagatgtgaatgta
gaaggggagcgagtgatgcgcagtaccaaacaacagggggagaagaaagaagagtgcgca
tcgggacagagtccccaactgcccagggggaaccggtaccgaccctctgaagaaagtcaa
cgtgaattgaggaagaggagggtgtctcttgtacagatgccaccaccaaagaggagaagg
ccagacacaagtaaggacagaaacagccagtctcagcaagcaggatcagattccgtccca
gtgtccccagcattaactccagaccagacaaacccccagacacccacagacgctggtatc
gaagccccatcagatatagaatcaatactgaaacgccaagtccatctgcctaccacccac
aagtacagcagagagccattgtatcgagtcatcaaaaaccagccgcccccaatcctctcc
attgaactggaccacaaccccttcaagtgcaaggcccctggctgtctgaagtccttccgg
aaggcctctctcctgcactaccacgtcaagtactaccatgcagacagcgaacacgcctct
gagggcagcatgcaaacccgggcctcagagaagcaggttggctctcaggagacacccagg
aggagacgcaccatgtcaggttctatacactctcccctgggtgacaggcaggctgctaat
gggatgaaccgtcatcgtcggagatcaccgagtgagaaacggaaggagaaccagcaaacc
aacagcagaccccatgaagaaagagaatggagcgccagtgaaatgggggaaaagattaga
gggaagactgaaagagacttccttctcaataaacagaagaaaaggaagaagacggggagg
tccaagtcagagaatacgaatggtgaggagaacatgggcatctccttatttaactctact
cagtccaatctggtatccaaattctccctcttgcacaaacacaagttatcttacgactca
agtccagaacacatcacagatcaggtgcaagaagacgatgaaagtgattggtccacagtc
agcgctgagtggagtgatgagtacatggaggcggagctggatgtgaccactcccgtgtcg
gaacagaatgtatccatggtgaccaagggctctgacacagtgcgctgtgtctgtgaggtg
gaggaggagaatgatttcatgattcagtgtgatgaatgtctgtgctggcagcatggcacc
tgcatgggcctctttgagcacaatgtgcctgacacttatagctgctacatttgcagagac
ccaccagcccagagaccgagccagcgttactggtacgacagggattggctgagcagtggt
cacatgtatggcctgtctttcctggatgagaactactcccaccagaacaggaagaagtta
atggccactcaccagctcctgggtgacgttcaccatgtctttgaggtgctcaacggcctg
cagcttaagatgagcatcctccagacccagacacactctgacctgaagctgtggcgccag
ccctggaagcaggaggagaagcttggtatgagctgcagtatggcgaccagcaggacccct
tcacctgcagccaacgaccgagaggggggcgaagcgctaaaggcaatgtcagtctccacc
ctctctgagaaggccaaaagggttcagatgagcccaacatccttccaggactcgaacgct
tcctacatcagcagtgagcactgctaccagaaaccgcgagcgtactacccagcggtggag
cagaggctggtggtggagacacggggaggctctgagctggaggacagtctgaggagcaca
gagaacctgctcgaacaggagcaacgctatggtggcccactggacccagacagagccaaa
ctgtaccccagctccctgctgcaggaccgggccaagattcaccccattaccctacaacca
gacaagaagctgtatgtgggtagggagagtgaagtagaggtgaagactgaagaggctgag
cccagcccagacataaagccagacccagaaaaagacaatgtgctgcatcagcagtggcag
atcaaccttttggatcacatagaagccatgcagaaccaagtcacacacaggatggacctc
attgagaaagagctcgatgtgttggagagttggcttgactacacaggggaactggagcct
cctgacccgttgacccggctgcctcaactcaaacaccgtatcagacagatgctcacagac
ctgggcacggtgcagcagatctccctctgctcctcctaa
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