Oncorhynchus tshawytscha (Chinook salmon): 112216025
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Entry
112216025 CDS
T05605
Symbol
syt6b
Name
(RefSeq) synaptotagmin-6
KO
K19906
synaptotagmin-6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216025 (syt6b)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
112216025 (syt6b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
Transglut_C
CEP76-C2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
112216025
NCBI-ProteinID:
XP_024231384
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All DBs
Position
LG02:complement(38637055..38691657)
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AA seq
555 aa
AA seq
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MSSAEEREDHDMYCEKAVALIIDLCLDDSPLLQPNTCQDFITLLATNQNPNSPGSDLSFS
LLLLVFVACGLGLLSVIVFAFWKLCRVHWRTKDLSSSATALAPPSSASDRPYDRALPAHG
HRPTLVHAHTHTHVMASDKLNPLDPASFLEAAVKISHTSPDIPAEVQLSMKDHFLRRTRM
SRQTTEPNSSNRHSSFKKHLPRQMHHVTSLDRGSDFPYTEDQSTSLASLGRIQPELYKQS
PLEADESSKNCAAAKTCGKINFSLKYDYESEALLVNILKAFDLPAKDLCGSSDPYVKIYL
LPDRKRKFQTRVHRKTLNPMFDESFQFTVPYEELGSRKLHLSVFDFDRFSRHDMIGEVIL
ENLFEVSDLSREMAIWKDIQYATSESVDLGEIMFSLCYLPTAGRLTMTVIKCRNLKAMDI
TGYSDPYVKVSLECDGRRLKKKKTTIKRNTLNPTYNEAIIFDIPPENMDQVSLRISVMDY
DLVGHNEIIGVNRVGSHAEGLGRDHWNEMLAYPRKPIAHWHSLLEASKSQKEWKTRTASF
DSQGSCPSPRLLSSP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcggaggagagagaggaccatgatatgtactgtgagaaggcggtagccctc
atcattgacctctgtctggacgacagcccactgttgcagcccaatacctgccaggacttc
atcacactgctagccaccaaccagaacccaaactctccagggtcagatctctccttcagc
ctcctgctcctggtgtttgtggcctgtggcctgggcctactgagcgtcatcgtctttgcc
ttctggaagctgtgcagggtacactggcgcaccaaggacctctcctccagtgccactgcc
ctcgcccccccctcctctgcctctgacagaccctacgacagagccttgcccgcacacggc
cacaggcctacgctcgtacacgcacacacgcacacacacgtcatggcatcggacaagctg
aatcctttggacccggcaagtttcctagaggcagctgtgaagatcagccacacgtcacct
gacatccctgccgaggtgcagctgtccatgaaggaccacttcctgcgccgcacgcgtatg
tccaggcagaccaccgagcccaactcctccaataggcacagctccttcaagaagcacctc
ccccgacaaatgcaccatgtcaccagccttgaccgaggcagcgacttcccctatacagag
gaccaatccaccagcctagccagtttgggccgcatccagccagagctctacaaacagagc
ccactggaggccgacgagtcctccaagaactgcgccgccgccaagacctgtggtaagatc
aacttctccctcaagtacgactacgagtctgaggctctcctcgtcaacatcctcaaggcc
ttcgacctgcccgccaaggacttatgcggcagctccgacccctacgtcaaaatctacctc
ctgcctgaccgcaagcgcaagttccagacccgcgtccatcgcaagacgctcaaccccatg
tttgatgagtccttccagttcactgtgccctacgaggagctgggcagcaggaagctgcat
ctgagcgtatttgactttgaccgcttctcccgccacgacatgatcggagaggtcattctg
gagaatctgtttgaggtgtcggacctctcccgtgagatggccatctggaaggatattcag
tacgccacctctgagagtgtagacctgggggagatcatgttctctctctgttacctgccg
accgcaggccgactcaccatgaccgtcatcaagtgcaggaacctcaaggccatggacatc
acaggatactcagacccatatgtcaaggtctccctggagtgtgacggacggcgcttgaaa
aagaagaaaaccaccatcaagaggaacactttgaaccccacctataacgaagctatcatc
ttcgacatcccccctgagaacatggaccaagtcagcctgcgcatatccgtcatggactat
gacttggtgggacacaatgagatcataggtgtaaacagagtgggcagtcatgcagaggga
ctgggcagagaccactggaacgagatgttggcctatccacgcaagcccatcgctcactgg
cactctctactggaggcaagcaagtctcagaaagagtggaaaacccgcactgcaagtttt
gacagccaaggctcttgcccttctccaagactcctgtctagtccatga
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