Oncorhynchus tshawytscha (Chinook salmon): 112216074
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Entry
112216074 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112216074
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112216074
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112216074
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
112216074
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112216074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112216074
NCBI-ProteinID:
XP_024231490
LinkDB
All DBs
Position
LG16:complement(61945076..61972003)
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AA seq
1231 aa
AA seq
DB search
MADNKGEEDMESASKLNSEPRGEDSEDPELKDVNSVIVIEPDSKEGDDLLSQENVSQMPT
PANVGGGGDASSNSAGAGGAGTTSSSPVGNTNGGTTESSGAGDIAGTSPTFTTEMSPPPT
VPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVPGPNG
QPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSAQMCTSCEDNADTIGF
CAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVSASGQRPVFCPVHKQEPLKLFC
ETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMAKLQEKKTYVHYSHAHVTSRL
KEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIANLARQ
ILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPTFWAK
NVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQQAFA
QQKQQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPPMVQQQPPRLISMQAQQ
RGPMNGGPLMYPPHHMRLAPGQGRMPSPSAQPRMPNGQQYPPMMQPQLQRQLTIDSEMSH
HRFRLLHLTGHSNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIEL
IPSVTNPENLPCLPDIPPIQLEDAGSSSLDALLSRWISASTYPQLGLWPPVDMNPSPGLS
THSPGSSGLSNSHTPVRPSSTSSTGSRGSCGSAGRPVPASAPMEQQVKVKQEPGIEKDCG
FSGTTTSNVKMERVKDGGRSACMMSSPEISRTPPLPVLGSVASASSVQDALKKLGEHVKT
EPQDQEACSGANGPSKAPSTSPSTKASDAPLTNSKGAGPATLRIPRTAMGTNQSGAGGKD
DDPNEDWCAVCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYE
PDDEPRGEKDTSEQGLSPEDQRRCERLLLNVFCHELSEGFQEPVPPSIPNYYKIIKKPMD
LTLVKQKLQLKHIQHYQSPIEFVSDVRLVFSNCAKYNEEYARTHSKAMAAVQNSTGRSSQ
MSRIIQVYDEEKQSNVQADSEVAQAGKAVSLYFEERLLELYPDESFPEVPEEPEAPVGEG
EEADLTEDSEDEFVQPKRKRLKTDEKMLHIK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagcgcttccaaattaaattcagaacca
cggggagaggatagcgaggaccccgaattgaaagatgtgaattcggtgattgtcatagag
cccgattcgaaagaaggagatgatttactatcccaagagaatgtttctcagatgcctaca
cccgctaacgttggtggaggaggggacgcaagcagcaacagcgcgggcgcagggggggca
ggcaccacaagcagtagcccagttgggaacaccaatgggggtacaactgagtcctcgggt
gctggggacattgctggaacctcaccaacattcacaaccgaaatgtccccaccgccgacg
gttccaccagccaaccccgtcaccccaataaaccttatggatacgtgcgctgtgtgtaaa
caaagtctccagacccgtgactgtgaacccaaactattaccgtgtcttcactcattttgc
ttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgcccgggccgaacgga
cagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgtcaagactgcaaa
cagagcgacatcattgacaactactttgtcaaggacactaccgaggcctccaacacttca
gatgaaaaatctgcacagatgtgcaccagttgtgaggacaacgcagataccataggcttc
tgtgcagaatgtggagagtggttgtgcaagacctgcatcgaggctcaccagagggtcaaa
atcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggagtctgtaagtgcg
tcgggtcagagacctgtgttctgtcccgtccacaaacaggagcccctgaaactcttttgt
gaaacctgtgacacactcacctgtcgggactgccaacttctggagcacaaggagcacagg
taccaatttctggaggaggccttccagaaccagaaaggcttcattgagacacacatggcc
aaattgcaggagaaaaagacctatgtccactactctcacgctcacgtgacaagcaggcta
aaggaagttactgagacccataggaaggtggagcatgagatcaagatagctgtgtttact
cttatcaatgaaatcaacaagaagggcaagtgtttactgcagcaacttgagagtgtgact
aaggagaggagcatgaagctgttttcccagcagacagacatcgccaacctggccaggcag
atcctccacgtgctcaactttacccactctgccattaacagcggcagcagcaccgccctg
ctttacagcaagaggctgatcatctaccagctgcgcaaggttctgaaggctggactggaa
ccagtgcctcaagctaatggttctgttcgcttcttctgtgaccccacattctgggctaag
aatgtggtcaacctagtagggaacctggtgattgagaagatgccccaggctcagcaccct
cccaacattatggtggggcccatctccccgggccatggccacccaggccacggaaaacac
ccagggcagatcaacctggctcagctccggctgcagcacatgcagcagcaagccttcgcc
cagcagaaacaacagcagcagcagcaccaacaaccacaccagcaacaacagcagcaccaa
cagaggatccaggagcagatgcgtattgcttcccaaatgtcccagcagcaccctaggcag
ggtggacctccgatggtacagcaacagcccccgcgcctcatcagcatgcaggcccagcag
aggggccccatgaacggcggtcccctcatgtaccccccccaccacatgcgcctggccccg
ggacagggccgcatgcccagccccagcgcccagccacgcatgcccaatggccagcagtac
ccccccatgatgcagccccagctgcagagacagctgactatagattctgagatgagccac
cacaggtttcgtttgttacatctaacagggcattctaacccaggtcatgctggacccttc
ccagtggcctctctccacaacgtgagcgctgccaaccccaccagtcccaccagtgccagc
atggctagtgcccatgcccaccgtggccccgccagccccatagtgggcgccattgagctc
ataccctctgtcaccaacccagagaacctgccctgcctaccagacatccctcccattcag
ctggaagacgcaggctccagcagtctggacgccctcctgagtcgctggatctcagccagc
acataccctcagctgggcttgtggccccccgtggacatgaacccctccccgggactctcc
acacactcacctggctcctcaggcttatcaaactcccacacgcccgtgcggccatccagt
acttccagcacaggaagcaggggcagctgtggctctgcggggaggccagtgccagcgagc
gccccaatggaacagcaggtcaaagtcaagcaggagcccggaattgagaaggactgtggc
ttctctggaactaccacctccaacgtcaaaatggaacgagtgaaggatggagggaggagt
gcgtgcatgatgagtagtccagagatcagccggactccccctctccccgtgctgggctct
gtggcttccgcatcctctgtccaggacgccctcaagaagttgggggagcacgtcaaaact
gagccccaggaccaggaggcctgcagcggggccaacgggcctagcaaagcccctagcacc
agcccatccactaaggcctcagacgccccgctgaccaacagcaagggagccgggcctgct
accctgcgaattccacgcactgcaatggggaccaaccagagcggggcgggagggaaggat
gatgaccccaacgaggactggtgcgccgtgtgcaacaacgggggagagctgctttgctgt
gaccgctgccccaaagtcttccacatcacctgtcacatccccaccttgaagtgctccccg
agtggagagtggatgtgcacgttctgccggagcctggccagcccggagatggagtacgag
cctgacgacgagcctcgtggcgagaaagacaccagtgagcagggcctgagtcctgaggac
cagaggaggtgtgagcgtctcctgctgaacgttttctgccatgagctcagcgaggggttc
caggagcctgtccctccctctatccctaattactacaaaatcatcaagaagcccatggac
ttgaccctggtgaaacagaagctacagttgaagcacatccagcactaccagagccccata
gagtttgtctcggacgtgcgcctggtcttcagcaactgtgccaaatacaacgaggaatac
gccaggacccacagcaaggccatggctgctgttcagaattcaacaggcagaagcagccag
atgtctcgaataatccaggtatatgatgaggagaaacagagtaatgtacaggcggactcg
gaggtggcgcaggcagggaaagccgtgagtttgtactttgaagagaggctgctggagcta
tacccagacgaaagtttccctgaggtaccagaggagcctgaggccccagttggagaggga
gaggaggcagatctcacagaagactcagaggatgagtttgtgcagcctaaacgcaagcgg
ttaaaaacagatgaaaagatgcttcacatcaagtga
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integrated database retrieval system
