KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112216075
Entry
112216075         CDS       T05605                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112216075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112216075
   03400 DNA repair and recombination proteins [BR:otw03400]
    112216075
Spliceosome [BR:otw03041]
 Complex B
  Other components
   Prp19 complex
    112216075
 Complex C
   Prp19-CDC5 complex
    112216075
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112216075
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36 Rv0250c
Other DBs
NCBI-GeneID: 112216075
NCBI-ProteinID: XP_024231501
LinkDB
Position
LG16:complement(61975710..61980983)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacttcatcagtagctggtgaagtatttgtcgatgccctaccgtattttgac
cagggttatgatgcagcgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagagactagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcgc
attgagaacctggaacttatggcacactacggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggctcaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcatggtgacgagaataaggaaaac
attcgacaggacttctag

DBGET integrated database retrieval system