Oncorhynchus tshawytscha (Chinook salmon): 112216123
Help
Entry
112216123 CDS
T05605
Name
(RefSeq) UHRF1-binding protein 1 isoform X1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216123
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112216123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
112216123
NCBI-ProteinID:
XP_024231618
LinkDB
All DBs
Position
LG16:complement(65624013..65678879)
Genome browser
AA seq
1363 aa
AA seq
DB search
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRAPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQSRAFHASFELWQLQGNSLNPKWQKTDLRYTRITDPKRGEVLTF
KEINWQSLRIEADAIESEDQDLGSIPLRLITNQGRIRIALKRRVKDCNVLASKLLFILDD
LLWVLTDSQLKAVIHYAKSLSEAMEKSAQQRKNMAAESLQTAPPSPGIHNLWTDPSPPPN
VGVPSTLDQYFDQHDVKESSYHTFISRLDLHICNDSSSTDPDEPPPPGSQGAMQLTFRKL
GFDYYPIHRPADGCQHWERHCGAMEARAQWACRLLQEFQRRVEASGIPGPHSEIPNQAKD
SPAKRAHGPNCVSLDTDGQPSPPDRDQSSRRNSIAPPPPGNPLKRLRSSCVVVRMDDLDI
HQVSTGGRHSKKTQSLISCNRKALNLADNIPAIHLQFTEYYFPDNPGLPVPNTNLYAQLN
GLQLCLDPASLLWVNLFSRGLLRTLEQVKAFYQLQDGSKAEEHVDIRMDAAQIKLIIPLE
SSIMDHQDRPQSLNITVPQMVLSNTCHSPHGTRADLNATYSSFSTCHFFQSAPPCSFPRD
QSAFLPLPSAFLQHSLEMEPLPFSEMRPLQAKDVWSLSLSRLSVSFEGARKSNKGRAHPF
VEPFTMSVWICRPCAFKGCSLVSSPSEQAPVDPNHGSLEQENQLPSNPDHHNQDSKKEAP
VASIHFLAQAITPVKVWLNHYQYVALLRMKDTLARLGGELGRDTRDAKQARGQESEPPTM
CLALLMDSVELGFLLPPAAMEPEEEEAHTPGSESPSLTDSDLSPTHQATSPGPLEDSGIG
NGTATVNSSPPIEQEVDCVVEEASEAVEVMEGETTQEDGPVPSPPFSPEHHPSLLSRDPS
TFSLEEELSNALTATKDVTKDAFSASLDLTKGAFSITKDAFSFMSRGSGMSKLFTTQAKE
QRPEEGCPMASLRLQSMKLSLSQYSFDSAILDGSLPDDHLSVDSDCSDNILMDESGVESM
MRPNSTLGPMDSGGSAAPGTEGGSSADLSSSLSQSIEDITQDTASVLLLVLSGIACVADL
KGEDLVVAVEVQHLTSRQMGNVRVSDLLARQMSGGSTLGQRQGCRSAPVVGMRIEMGPSA
ARHGPLSALVGHLELGVQGCRAELLASTLATLGPFLEDELSADVQPMKIRLDNVTITLKD
DGPKIYPTAPQPQPATFTIDQVVLERSDDGLFRIKGGAGPDSAGGAVVCLEKPDSSCSVQ
PQQSTSPSLGSQLLEAQLALSQALTDRERLLLEVRKYDPMFDL
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataataaaaaaacaaatattgaaacatttgtccaggttcaccaagaacctg
tctccagacaagataaacctgagcacactgaagggcgagggtcagctgtccaacctggag
ctggatgaggaggtgctgcagaacatgctggacttgcctacctggttggctgtcacccgg
gtctactgcaacaaggctgcaatcaggatacaatggacaaagttgaagaccagccccatc
tgcctgttcctggacaaggtggaggtggagatgagaacgtgtgaggagccccgtgcacca
aatggcccctcccctattgccatcactgctggccagagtgagtatggcttcgctgagaag
gtggtggagggaatgtctgtcatcatcaactccatcaccatcaaggtgcagtcccgtgcc
tttcacgcctccttcgagctctggcagctccagggtaacagtctcaaccccaaatggcag
aagactgacctccgctacacccgcatcacagatcccaagagaggagaggttttgacgttt
aaggagatcaactggcagagtctgcgtatagaggctgatgccatagagagtgaagaccag
gacctgggcagtatcccactacgcctcattaccaaccagggacgcatccgcattgccctg
aagcgtagggtgaaggactgtaatgttctggcctcgaagctgctcttcattttggacgac
ctgctgtgggtgctgacggactctcagctcaaagctgtcatccactacgccaagtccctg
agtgaggccatggagaagtctgcccagcagaggaagaatatggctgcagagtctctacag
actgcacccccatcccctggaatccacaatctatggacagacccttcaccccctcccaac
gttggtgtacccagtaccctggaccagtactttgatcaacacgacgtcaaagagtcctcc
taccacaccttcatctctcgtctagacctgcacatatgcaacgacagctcctcaacagac
cccgatgagcctccacctccaggctcccagggtgcaatgcagttgaccttccgcaagctg
ggttttgactactatcccatccaccggcctgccgatggctgtcagcactgggagcgtcac
tgtggagcaatggaggcccgagcccagtgggcttgcagactgctgcaggagttccagagg
agggtggaggcgtcaggtatccctggtccacattctgagatccccaaccaggccaaggac
tcccccgccaagagggctcacggccccaattgtgtctctcttgacacagatggacagccc
agcccccctgacagggatcagagctccaggaggaactcaatagcacctcctcccccgggg
aatcctctgaagaggctccgctctagctgtgtggtggtacgaatggacgaccttgatatc
catcaggtgtctacagggggacgccacagcaagaagacccagtccttaatatcctgtaac
cgcaaggccctgaacctagcagacaatataccagccatccacctgcaattcacagagtat
tacttccctgacaaccctggtttgcctgtacccaacactaacctgtatgcccagctgaac
ggcctacagctgtgcctagacccagctagtctgctgtgggtcaacctgttctcgcggggc
ctgctgcgtaccctggagcaggtcaaagccttctaccaactccaggacggcagcaaggca
gaggagcacgtggacatccgcatggacgcagcacagatcaaattgattattcccctggag
tcatccatcatggaccaccaagacaggccccagtctctgaacatcactgttccccagatg
gtcctcagcaacacctgccactccccacacggcacccgggccgacctcaacgccacctac
agcagcttctccacctgccacttcttccagtccgctcccccctgctccttcccccgagac
cagagcgcctttctccccctaccctctgccttcctccagcactccctggagatggagccc
ctgcccttttctgagatgaggcccctccaggccaaggacgtctggtccctaagtctctcc
cgcctgtccgtgagcttcgagggggcacggaaaagcaacaagggcagagctcaccccttc
gtggagcctttcaccatgtctgtgtggatatgtcgtccatgtgcgtttaagggctgttcc
ctggtctcctctcccagtgaacaagctcctgtagatcccaaccatggatccttagagcag
gagaaccagctcccttccaaccctgaccaccacaaccaggacagtaaaaaggaggctcca
gtggcctctattcacttcctggcccaggccatcacaccggtcaaagtgtggctcaaccac
taccagtatgtggccctgctgcggatgaaggacaccctggccaggctggggggcgagctg
ggccgggacaccagggacgctaagcaggccaggggccaggagtctgagccccctacgatg
tgcctagcccttctaatggactcagtggagctggggttcctgctaccacctgcagccatg
gagccagaggaggaagaggcccacaccccaggatctgaaagccccagcctgacagactct
gacctctcccccactcaccaagctacatcgccaggccctcttgaggacagtgggatagga
aacggtactgccaccgtcaacagctctcctcccattgagcaggaagtggattgtgtggta
gaggaggccagcgaggcagtagaggtcatggagggggagacaacccaggaggatggtcct
gtcccctctcctcccttctcccctgaacaccatccctccctcctgtctagggacccctct
accttcagcctggaggaagagctgtccaacgccctcaccgccaccaaggacgtcaccaaa
gatgcctttagtgcctccctggacctgactaaaggggcgttctccatcacaaaagatgcc
ttcagcttcatgagtcgcgggtcagggatgagcaagctgttcactacacaggccaaggag
cagcgccccgaggagggatgccctatggccagtctgcggctccagtccatgaagctgtct
ctctcacagtactcatttgacagcgccatcctggatggaagcctgcccgacgaccacctc
tcagtggacagcgactgtagtgacaacattctcatggatgagtcaggagtagagtccatg
atgcgacccaacagcacccttgggcccatggatagtggaggcagcgctgccccggggaca
gagggagggtcatcagccgacctgagcagctccctgtcccagagcattgaggacatcaca
caggacacagcctctgtgttgttgctggtgctcagtggtattgcctgtgtggcggacctg
aagggagaggacctggtggtggccgtggaggtccagcatctcacctccagacagatgggc
aacgtaagggtctctgacctgctggccagacaaatgtcaggtgggtccaccctgggacag
agacagggctgcaggtcagctccagtggtgggcatgcgaatagagatgggtccctctgca
gcacggcacggtcccctctctgcgttggtaggtcacctggagctgggtgtgcagggctgt
cgggcggagctcctggcctccaccctggctaccctggggcccttcctggaggatgagctc
agtgctgatgtccagcccatgaagatccgcctggacaatgtcaccatcactctgaaggat
gatggtcccaagatctacccgacggccccccagccccaacctgccacctttaccatagac
caggtggttctggagcgctctgatgatggcttgtttagaatcaaaggtggtgcaggccca
gactctgcaggtggtgctgtggtatgtttggagaaaccagacagttcttgttctgtccaa
ccacagcagagcacgagtccatccctggggtcccagctattggaggctcagttggccctc
tctcaagccctcactgaccgagaacgtctcctcctggaggtcaggaagtacgaccccatg
tttgacctgtga
DBGET
integrated database retrieval system
