Oncorhynchus tshawytscha (Chinook salmon): 112216165
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Entry
112216165 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112216165 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216165
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112216165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
112216165
NCBI-ProteinID:
XP_024231716
LinkDB
All DBs
Position
LG16:67661312..67703099
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AA seq
839 aa
AA seq
DB search
MTELEIDQSHLPRVQEVCHVFAVLEDGALAQNLQEQEIEQYYTTNIQKNQLVQNDIRIAK
RLQDEEEEQIAQHRALSQASRQLEEQDSKYARMIQEEIQRCADEAHRREQEDEEMAKHIQ
EEEELRVRQRSSGQESLRDDCTNVRGSPSSCPRLPALSTSPNQGEGLHHQPATSRWQCSI
SNTQPQSHSTAEPLYETHKSAGQNNRTQSSHNGHFNLPRLIRNYLQCPPPDYLSDEGSED
ADTVFPEHLPPSRPCRLEKWLNTAPSRCQAPVYHLPERSYRSLGSPISSREERSRMWERG
SGTREERHRGSCQDRGVKEKRARIWDKNPRAKHDRGYDRDPRSEEGRGWRYISSTNDSAR
GLQDRDRDGVRRRWTYRETSDNKQVHFQDNASKHCYSYHDDSRLAVNVWDLIAHDLRERG
VAVRQSFHGGSRSWGVRGEVRDCQVHDGENAVVHSDSQHQQRAFLRAVPTRRSYHGDVGE
RKRASQSEGYSNQGHGAEGERILENMTIVEGSGTEVNVEHSRGGRRSSGDPRNRVSSGGD
QERDGRDDGHHHSERRVRSASDCQHGYKQEEQNSSEEEEERREERPLRRAHHFSQSFCSR
GASIRARSRHTSKAGAVLQPEEGVCLDLGELHQVLLDEELARRLQKEEEKLLTRSPPARS
SLSQHDSYPEGDFRVAQVAQDEEIARFMQKQEIQSNRQSRDLNGPGSRHEPHDLADPHNR
RTVRERPIQRERLDSEGLPSPTEECSPDYQAPSPTSTLSQQPIRNIAEELDPTFKTKRPG
KESIRVGQTISGPSSCQSHPIPHLHDFMEEPTFIPPTKRQSAKSGRAKSKEKKENCKQQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctggagattgatcagtcccacctgccacgggtccaggaagtgtgccatgtt
tttgctgtcctggaggatggagcattggcacaaaacctacaggaacaggaaattgagcag
tactacaccaccaacatccagaagaaccagctggtgcagaatgacatccgcatcgccaag
aggctgcaggatgaggaggaggaacagatagctcagcacagagccctgagccaggcgtct
agacaacttgaggaacaggattcgaagtatgcccggatgatccaggaggagatccagaga
tgtgctgatgaggctcacaggagggagcaggaggatgaggaaatggctaaacacatccag
gaagaggaggagctgagggtcagacagaggagcagtgggcaggaaagcctccgtgatgac
tgtaccaacgtccgtggctcaccctcgtcatgcccacgcctgcctgctctcagcaccagc
cctaaccagggagaagggctgcaccatcagcctgctaccagcaggtggcaatgttccatt
tctaacacacagccacagtcacactctactgctgagcctctgtatgagacccacaagtca
gcaggacagaataacagaacacaatcatcacataatggacactttaatctgcctagactc
atcagaaactacctccaatgccctccaccagactatttgagtgatgaaggctcagaggac
gcagacactgttttccctgaacacctccctccatcccggccctgtagactggagaaatgg
ctcaatactgcccctagtcgttgccaggctcctgtgtaccatctaccggaaaggagttac
aggagtctcggcagtcccatcagctccagagaagagcgcagcaggatgtgggagagggga
agtggaacaagggaggaaaggcatagggggagttgtcaggataggggggttaaggaaaag
agggctaggatttgggataagaatcccagggcaaagcatgaccggggttatgacagggac
cccaggtcagaggaggggagagggtggcgctacatcagtagtactaatgactctgccaga
gggctgcaggatagagaccgagacggggttaggagaaggtggacctacagagaaaccagc
gacaacaaacaagtccacttccaggacaatgccagcaagcattgttatagttaccatgac
gacagcaggctcgcagtgaatgtatgggacctgattgcccatgacttaagagagaggggt
gtggctgtgaggcagagcttccacggggggtcaaggtcatggggggtcagaggtgaggtc
agagactgccaagtgcatgatggggaaaatgccgttgtccacagtgactctcaacatcaa
cagagagcttttctaagagctgtccccaccaggcgtagttaccatggagatgtcggggaa
agaaagagagcctcacaaagcgaaggctacagtaaccaaggccatggagcagagggagaa
agaatccttgaaaacatgaccatagtggagggtagtgggactgaggtcaatgttgaacac
agcagaggggggaggaggagtagtggagaccctaggaacagggtcagctcaggtggggac
caggagagggatggcagggatgatgggcaccaccatagtgagcgcagggtgaggagtgca
agtgattgccagcatgggtataagcaggaggagcagaacagctcagaggaggaggaagag
aggagggaggagagacccctgcggagagcccaccatttcagccaaagcttctgcagcaga
ggggcctccatcagggccagatctaggcacacctccaaagcaggagctgtgctgcagcca
gaggagggggtgtgtctggacctgggggaactgcaccaggtgttgctggatgaggagctg
gccaggaggctgcaaaaggaggaggagaaactgttgactaggagccctccagcccgttct
tccctctctcaacatgactcctacccagagggagacttcagagttgcgcaagtggctcag
gatgaggaaatcgcccgcttcatgcagaaacaggaaatacagtcgaatcgccagtcacgt
gaccttaatggcccgggatcacgacatgaaccgcatgacctggctgacccccacaacagg
agaactgtcagagagagaccgattcagcgggagagactggactccgagggcctcccatct
cctactgaggagtgttctccagactatcaggcccctagccccacctcaacactatcacaa
cagccaatcagaaacattgcagaggaactggacccaactttcaagaccaagagaccaggc
aaggagagcatcagagtgggacagaccatttctggcccatcctcctgtcagtctcatcca
atcccccacttacatgacttcatggaggagcctacgttcatcccgcccacgaagaggcaa
agcgccaaatcaggacgcgccaaatccaaagagaagaaggagaactgtaagcagcagtga
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