Oncorhynchus tshawytscha (Chinook salmon): 112216175
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Entry
112216175 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein
KO
K05747
Wiskott-Aldrich syndrome protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112216175
04530 Tight junction
112216175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216175
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216175
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112216175
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112216175
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
112216175
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EVH1 / WASP homology (WH) domain-containing proteins
WH1 domain-containing proteins
112216175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
PBD
WH2
CAF1
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
112216175
NCBI-ProteinID:
XP_024231741
LinkDB
All DBs
Position
LG16:68009034..68018959
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AA seq
519 aa
AA seq
DB search
MSRGSKSKGVQEYSPSSLLSPQENERLEDLLGRRCASLATTVAQLYMALPHSPTCWSLQQ
TGVACFVKDNHRRSYFIRLFDVKKGQLIWEQELYNQMVYHCARPFFHTFAADDCQVGLNF
ADEQEAQTFLSAVDEKINQRNRQVSEKKHRPLPSSDRGGRPPLPGKGPGSPTSPSMVTMD
IQNPDIQASRYRSVTPVPAPAFVSKGKKDKKKDKKKSSKLSKADIGAPSGFKHVSHVGWD
PNNLDPDLKKLLSCAGISEAELKDEETSQLIQQVIENSGGMEAVKKAMNTGPGPPHPPPG
RQGPLPPVPGSCSSPPAPPPPRGGRSGPLPPVPGQPGRGPPPSQPPPSRGALPPPPPLGD
RGGLPPPPPSVSHSSLPPXPSPGHHLSMPAPPPPAPSTPSRGGPAPPPPPPPPPPPAQSS
GDFPPPPPCKGPPPPAPASSGGGGGGGGRGALLDQIRLGRKLKNVTDSPEPPPPAQEDSE
GIVGALMMVMQKRSKVIHSSDEGDEEGGYDDEDDDEWDD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggggatctaagtctaaaggagttcaggagtacagtcccagctctctgctgagc
ccacaggagaatgagaggctggaagacctgctggggaggaggtgtgcttccctggccact
accgtagcacagctgtacatggccctgccccacagtcccacctgctggagcctgcagcaa
actggggtggcctgcttcgtcaaggacaaccatcgccgttcctacttcatacgcctcttc
gatgtcaagaaaggacagctgatctgggagcaggagctctataaccaaatggtctatcac
tgtgcccggccattcttccacaccttcgctgcagatgactgccaagtggggctgaacttt
gcagatgaacaggaggctcaaaccttccttagtgcagttgatgagaagatcaaccagaga
aaccgtcaagtgtcagagaagaaacatcgccccctgccttccagtgacagagggggacga
cctccacttcctggtaaaggacctggcagtcccacttctccctccatggtcaccatggac
atccagaacccagacatccaggcttcacgctaccgctccgtcacacctgtacctgcccct
gcctttgtcagtaagggaaagaaggacaagaaaaaggacaagaagaagagcagtaaactc
tccaaagcagacattggagcacccagtgggttcaaacatgtgagtcatgtgggctgggac
cccaacaacctggaccctgacctgaagaagctgctgtcctgtgctgggatcagtgaggct
gagttgaaggatgaggagacctcccaactcatccaacaagtcattgagaactcaggcggc
atggaggcagtcaaaaaggccatgaacactggtcctgggcctcctcaccctccgcctggt
aggcagggtcctctccccccagtaccagggagctgttcctcccctcctgcccctcctcct
ccacgtggaggtcgctctggccccctgccccctgtcccaggacagccagggcgtggcccg
cccccctcccagccccctccttcacgtggagccctgccacctccacccccgttaggcgac
cgaggtggactcccaccacctccaccctctgtgtcccatagttctcttccacctnncccc
tcccctggtcaccatctctccatgcctgcacctcctcctcctgctccatccacccccagt
cgaggaggcccagcacctcctccacctcctcctcccccgcctcccccagcccagagctct
ggagactttcctcctcctcccccctgtaaaggtcccccaccacctgctcctgcatcttca
ggtggaggtggaggtggaggtggaagaggagctctgctggatcagatccgcctgggaagg
aagctcaaaaacgtcacagacagtcctgagccacctccgcctgcccaggaagactcagag
ggtatcgtaggagctctgatgatggtcatgcagaagaggagtaaagtcattcactcctct
gatgaaggtgatgaagaaggagggtatgatgatgaagatgatgatgaatgggacgactga
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integrated database retrieval system
