Oncorhynchus tshawytscha (Chinook salmon): 112216189
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Entry
112216189 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112216189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216189
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112216189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
PH_19
SlyX
PH_13
Motif
Other DBs
NCBI-GeneID:
112216189
NCBI-ProteinID:
XP_024231772
LinkDB
All DBs
Position
LG16:complement(68198154..68260764)
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AA seq
1494 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLLETQRRRIEELEGQLDRVSQENQDLRLERPTP
PRAPELPEQNHSNTNHRSEKPPSLPIHPGSSGGGNGSTTSPVAAPSPAVVVPPAGPSRER
RAHTKLTRGMSCGSNPAEREQRERLEHTDSSDTNSSTIRRNVEAETRCVEPPGPHIDGPY
SQTTAYLRGTERYSDNSRCPGPPGPRGLPCGAPPSSASLAWALRTRHQPASLALRKQEEE
ENKRCKASLSDSYELSTDLQDKKVEMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERL
RNSASESRMTRRIILSNMRLQYSFDDRQAQQQGAGTQTNFTHSVGIGPPHSPDTERTGDY
THLEDSFSKQVKSLADSIDDALTCRGGRDDSQEGSREGGGISDDFGECVWSSSSNPSSRR
GLGERSRGGGGGLSMHGDSTATSYSDVTLYMDDCMPSSPLSLDRAPSSTDTEYWGPRGGV
GGREDSRDTEGGGSSNSRRSTPCTECRDYRLRGAHLPLLTIEPPSDSSVDTSDRSDRGSL
SRQIYEQEPAGGAGSPQGTLKHSPNTPRPVSTTAAQGQTRAPGRGPPLPTHIPHHVAHHH
HHHPHHHQYPDTPSSSSSPSSPPHPLSSSSSAALPPGGLEQPCLSDGDNDSLNSTTNSNE
TVNCSSGSSSQDSLREPLPPLGKQTYQRESRHSWDSPPFNNDVVQRRQYRIGLNLFNKKP
EKGIQYLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDF
SGMDLDDALRKFQAQIRVQGEAQKVERLIEAFSQRYCVCNPTLVRQFQNPDTIFILAFAI
ILLNTDMYSPNVKAERKMKIEDFIKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHV
SQVQAVERVIVGKKPVMSLPHRRLVCCCQLYEVPDPNRPQRTGVHQREVFLFNDLLVVTK
IFQKKKTSVTYSFRQSFPLVEMQVHMFQNSYYLHGIRLTSAVLGGDSKVLIVFMAPSQQD
RTRFVSDLRESIAEVQEMEKYRVESELEKQKGVMRTGLLTGLVGGGVGVKGEVVNGTLGR
PSLDDNYSAGEGLKRSALSSSLRDLSDGGKRGRSNSVGSLDSTMEGSIISSPRPHQCYPV
PGVIPGCYPTEDYRPHRPILSPGTGVGGGPGQQQTAAGMGVGGVPSSVERAGVGSGPGGG
NTGSFLGSLFGSKRAKPPSPLIPPGPPYPAPVPPPTTGGPPPHSPSSLCQSEGGPSKIQA
LHAQYCHTAVVQPPPPYYHHHRYHVQAGPPPLPGGGVPPHILQRGPLPCRPPFGPPHAQL
QQLAHLSQFSQHGMQGRYGNIAVGCPPPLSPHSQHSQNPQFTLYHTQTPQSIRGGAVPSK
PPLTLSHSHPHPHAHSHTHPGHPLSAAPHPTAHPHQSHFIFGTLPHQHQHQQPPASVNAH
HATSAAQYQPQYPPLSSIPLPPLPFTPLLSPLPLLRLSALLPPSTPGSLSRGPR
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagccctgagagccccaaccgtgccgtggagtacctcctagagctcaacaac
ataattgagagccaggccaagctcctggagacacagcggcggcgcatcgaggagctggaa
ggccagctggaccgagtcagccaggagaaccaggacctgaggctggaaagacccactcct
ccacgagccccggagctccccgaacagaaccatagcaacaccaaccacagatcagagaag
cccccctccctgcccatccaccctggcagcagtggtggaggtaatggcagcaccaccagc
cctgtcgccgccccgtcccctgcggtggtggtgccccctgcagggccgagccgggagaga
cgtgcccacaccaagctgacccggggcatgtcctgtggctcgaacccagccgagagggag
cagcgggagagactggaacacacagacagctccgatactaacagctccaccatccgcaga
aatgtggaagcagaaacccgatgtgtggagccgccagggccccacatagacggcccttac
agccagaccacagcgtacctgcgtggcaccgagcgctacagtgacaacagcaggtgtcct
ggtcctccaggcccccggggacttccgtgtggggcccctcccagctcggccagccttgcc
tgggcactgcgaacacgtcatcagcctgccagtctggccctccgcaagcaagaggaggag
gagaacaagaggtgcaaggccagtctctctgacagctatgagctctccacagacctacag
gacaagaaggtggagatgttggagagaaagtacggtggctccttcgtgagccgcagagca
gcccggaccatccagacggccttccgccagtaccgtatgaacaagaactttgagcgcctc
cgcaactccgcgtccgagagccgcatgacacgacgcatcatcctgtccaacatgcggctg
cagtactcatttgacgaccgccaggcgcagcagcagggggccggaacacagacaaacttc
acacacagtgtgggtatcggccctcctcattcacctgacacagagcggacaggagactac
acacacctagaagactccttctccaaacaggtaaagtccctggctgactccatagatgac
gccctgacctgccgtggagggcgggatgactcccaagagggtagcagggagggcggaggc
atcagtgatgactttggggagtgtgtgtggagcagcagcagtaacccctcatcccgcaga
ggcctgggtgagagatcccgaggaggtggaggaggcctcagcatgcacggagacagcaca
gccacctcctacagtgatgtcactctatacatggatgactgcatgccctcctcgcccctg
tctctggaccgggcccccagcagcacagacacagagtactggggccccaggggaggcgtg
gggggccgtgaggacagcagggatactgagggagggggtagtagtaacagccgtcgcagc
accccctgcacagagtgtcgagactaccgtctaaggggcgcccacctgcccctgctcacc
attgagcctcccagcgacagctccgtggacactagcgaccgttcagaccgtggctccctc
agcagacagatctatgagcaggagccagcaggaggagcaggctctcctcagggaaccctg
aaacactctcctaacactccccgccctgtctccacaacagcagcgcagggccagacccgg
gcccctggccggggcccccccctgcccactcacatcccccatcacgtggcacaccaccat
caccaccaccctcaccaccaccagtacccagacaccccctcatcatcatcctcccccagc
agccccccacaccccctgtcctcctcctcctctgctgcgctgccccctggtggcctagag
cagccctgtctgtctgacggggacaacgactctctcaattccaccaccaactccaacgag
acggtgaactgcagctctggctcctcgtctcaggacagcctgagggagcccctaccccct
ctgggcaagcagacctaccagagagagagtcgacacagctgggactcaccgccattcaac
aacgacgtggtgcaaagacgccagtaccgcatcggactcaacctattcaacaagaagcca
gagaaagggatccagtacctgatcgagagaggctttgtgtccgacactccggttgggatc
gctcgcttcatcctggagaggaagggcctgagcagacagatgattggagaattccttggt
aaccggcaaaaacagttcaacaaggacgtactggattgtgtggtggacgagatggatttc
tctgggatggacctggacgatgctctgaggaagttccaggcccagatcagagttcaagga
gaagcccagaaagtagagaggctcatagaggctttcagtcagcggtactgtgtgtgtaac
ccaacgctggtccgccagttccagaacccagacaccatcttcatcctggccttcgccatc
atcctcctcaacacggatatgtacagccctaacgttaaggcagagaggaagatgaagata
gaggacttcatcaagaacctcagaggagtggacaatggccaggacattcccagggatctg
ttggttgggatctaccagcgcatccagaagtgggagctaaggaccaacgacgaccacgtg
tctcaagtgcaggcagtggagagagtcatagtaggcaaaaagcctgtgatgtctctgcca
caccgcaggctggtatgctgctgtcagctctatgaggtgcctgaccccaaccgaccccaa
aggacaggagttcaccaacgggaggtcttcctgttcaatgacctgctggtggtgactaag
attttccagaagaagaagacttctgtgacgtacagtttcagacagtccttccctctagtg
gagatgcaagtccacatgttccagaactcctactacctccacggtatccgcctgacctca
gcagtgttgggtggagacagtaaggtccttatcgtgttcatggctcccagtcagcaggac
cgcacccgctttgtcagtgacctgagagagagtatagctgaggtgcaggagatggagaag
tacagagtagagtctgagttggagaagcagaaaggggtgatgaggactggcctgctgacc
ggcttggtcggaggcggagtgggggtgaagggtgaggtggtgaacggcaccctgggaagg
cccagtctagatgacaactactctgcgggagagggactgaaacgctccgcactcagctca
tctctccgagacctatcagacggagggaaacgtggtcgcagtaacagtgttggctccctc
gacagtaccatggaaggttccatcattagcagcccccggccccaccagtgttacccggtt
ccgggcgtgatcccaggctgctaccctacagaagactaccggccgcatcgccccatcctg
agccccggaacaggggtggggggtgggccggggcaacaacagaccgctgctgggatggga
gttggaggggttcccagcagtgtagagagagcaggagtggggagcggccctggggggggc
aatacgggctccttcctgggctctctattcggcagcaaacgtgccaaaccgccaagtccc
cttataccaccggggccaccctaccccgcccctgtccccccacccactacgggagggccc
cctcctcactccccatcatctctgtgccagtcagaggggggcccttccaagatccaggcc
ctgcatgctcagtactgccatacggccgtcgtgcagccccctcccccctactaccatcac
catcgctaccacgtccaagctggccctcctcccttgccaggcgggggcgtgccccctcat
atccttcagagagggccgctcccctgtcgccctccttttggcccccctcacgcccagctc
cagcagctggcccatctctcccagttttcccagcatggcatgcagggtcgctacggcaac
atagcggtgggctgtcctccccccctttctcctcactcccaacattcccagaacccccag
ttcaccctgtaccacacgcaaaccccacaatctatcaggggaggcgctgtgccaagcaaa
cctcctctgactttgtctcactcccacccgcacccccacgcacactcccacacccacccc
gggcacccactcagtgccgcgccacaccccaccgcccacccacatcagtctcacttcatt
tttggcacgctgccccaccaacatcagcaccagcagccgcccgcctccgtcaacgcccat
cacgctacgtccgccgcccagtatcagccccagtaccctcctctctcttccatccccctc
cccccactcccctttaccccccttctatcccccttacccctcttacgcctctctgccctc
ctcccccccagcaccccgggcagcctcagcaggggccccaggtga
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