Oncorhynchus tshawytscha (Chinook salmon): 112216191
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Entry
112216191 CDS
T05605
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112216191
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112216191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
Motif
Other DBs
NCBI-GeneID:
112216191
NCBI-ProteinID:
XP_024231776
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All DBs
Position
LG16:complement(68844688..68855044)
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AA seq
1335 aa
AA seq
DB search
MNSRDVDSPVPRQANRGERQPKAQQGVSMKKKRTPSNAPPKHAPDSSRSTGTVRRIMGKG
KEIKLEKGKRTGRGPPSVTECQKNLSTPRKLYEASNASEDLSNDSGCVSGKLSYSDRSSD
ISDLTEGFLTASEGNQLSADTPSPSCEARPSGGEREANRDRLSGNAQISVRDMSTVGSAF
KRLGLSQENYIMHSVWDGNHSPGCGGSVLAFLPSLNVSGASMVNSEPTRELVDETHEDLV
RENDDLRSENQYLKDEMEEMRCEMLEMRDLFLEDEVCQLQELRLQLEQANKLCCILQYRL
HKAERRSLRVAQTGQVEGELVRSLEHDVKVAKSVSLRLHNELESVQQKNSRLEWENDALR
ERQQELEVAKQVQEGEMEKARESSLKRKNVRSPNSKTEKTLSPQDDSADLKCQLHFAKEE
SALMCKKLSKMVSESECMREVLSKYRSAYGDVDAAAHSSEGGTAKSPHTREAEVKVHLRL
VEEEATLLSRRIVELEVENHGLRAEMSDMRESVLGGGGEEKEEQPQKGARDNGDLPPLYV
RDVEDCEQSLRRECMQFEQEKREEQRRSVIECFQEEVMEIQHRDQPQTERLSPLSQIPRK
GSVGGEWEPLDNQQSYTRRGSVAHALNVKDHEALLALRDHACLVTSAIQLFVSPAKNGHS
SPPLSPHISRAKSYPQGKAQPLALDPLMQGHLHEALELLQAMLLALMGRVELLVTQGGEL
RVEGNWDPTAIPSLADQDTQNNTEVSAKKETGEGLHTVVVKERVRRATQSDHLDSCRDPM
MKLTLKVLWVLHQRGVGKRSGLEGIESRDLTTMSILHGLLQYLGTELQDSEDSMAGQHAK
AIWASDWKGLVSKMECSTGKTEAQEYPDQPGHPRGIQSEITETRNKTKPDRSILGSKKKN
WCYLSQEAAQLDREDPFKTWDHPIMPPSFPNLNLDQLTLDSSCTAPEKTVLRIYYSPLSA
RRVHLAHLRHITNTDRNSTTSVISARLSTSQNSLTPLCLRVSANLSDDMKEMTASLRQAV
HSSSPERRKGRVIVSGGWTVDVATTGTQTQMHPQMVSVGLQTDGPYSVIAVRGNPLRLSA
RTQQISTSLERLPGRTERFKSGSTSPKMYRRYSASASSSSSISPSSTTGFTSNSSTSSSA
SPGSEGVLWSLSHRGPAGPTWARPINPRAGPRLIHHSTINSELSSGGNNTKPTRKPGGAN
RYGLVTEFLRKMSGRADKPAQATAPGGGQKGKCSPTHKTLEVVPTRRPAAPVHRNNSVAR
IGNQRFMKQREEACRGQKEDNCPSQAHSQNQALRRDLSLESKLTLEDGNYDCISSKSLSF
CFARSSRLGPDQATA
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagagatgttgacagtccggtgccaagacaggcgaacaggggagaaagacag
cccaaggcacaacagggtgtcagcatgaagaaaaagcgaaccccatcgaatgcgccgccc
aaacatgccccagactcatccaggtcaacagggactgtccggcgcatcatgggcaaaggg
aaagagattaaactggagaaagggaagcgcacaggaaggggcccaccatccgttacggag
tgccaaaaaaatctaagcacaccgagaaaactatatgaagctagcaatgcttcagaggat
ttgagcaatgattcgggttgtgtgtcggggaagctatcctactcggacagaagttctgac
atttctgacttgacggagggatttctgactgcatcggagggaaaccaactttctgcggac
actccgtctccaagctgcgaggcaagaccaagtggcggagaaagagaggcaaatagagac
aggttgagtgggaatgcacaaatcagtgtacgcgatatgagcactgtaggcagcgcattc
aaacggctaggcctatcacaggaaaattatattatgcattctgtctgggatggaaaccat
tctcctggatgcggagggtccgttcttgctttccttccctcgctgaatgtcagtggagcg
tccatggtgaattcagaaccgacccgggagctcgtggacgagacgcacgaggatcttgtc
agagaaaacgacgatttgagatcggaaaatcagtatttgaaagatgagatggaggagatg
cgctgtgagatgctggagatgcgggatctgttcctggaagatgaggtgtgtcagcttcag
gagctgcggctgcagctggagcaggccaacaagttgtgttgcatcctgcagtaccgcctc
cacaaggccgagcgccgtagcctcagggtggcccagactggccaggtggaaggggaactg
gtccgctccctggagcatgacgtcaaggtagcaaagagtgtatccctccgcctgcacaat
gagttggagtccgtgcaacagaagaactcccggctggagtgggagaacgatgcgcttcgg
gagaggcaacaggagctggaggtggcaaagcaagttcaagagggcgagatggagaaagcc
agagaaagttctctgaagaggaaaaatgtcagatcaccaaacagcaagactgagaagacg
ctgtctccccaggatgacagtgctgatctgaagtgccagcttcactttgccaaggaggaa
tcagctctcatgtgcaagaagctgagcaagatggtgtcggaaagtgagtgcatgcgtgag
gttctgtcaaagtaccgctcggcctatggagacgtagatgctgctgcccactcctctgag
ggtggtactgccaagtccccccacaccagggaggcagaggtcaaggttcacctgcggctg
gtggaggaggaagcgacgctgctgagccgccgtattgtagagctggaggtggagaaccat
ggcctccgggcagagatgagcgacatgagggagagcgtattaggaggaggaggagaagag
aaagaggagcagccacagaagggggccagggacaatggggatctaccaccgctttatgtg
agggatgtagaggattgtgaacagagcttgaggagggagtgtatgcagtttgagcaggag
aagagggaagagcagagaaggagtgtgattgagtgttttcaggaggaggtgatggaaata
cagcatagagaccaacctcagacggagaggttgagtcccctcagtcagatccctcgaaag
gggtctgtaggtggggaatgggagcccctggacaaccagcagagttatacacgcagaggc
agtgttgcccatgccttgaatgtgaaagaccatgaggccctccttgccttgcgagatcat
gcctgccttgtgacctcagctatccagctttttgtctcaccggccaagaatggccacagc
tcccctcccttatctccccacatctctcgggcaaagtcttaccctcagggtaaagcccag
cctctggctctggacccactcatgcaaggacaccttcatgaggctctggagcttctgcag
gcaatgctgttagccttaatgggcagggtggagttattggtgacacaaggaggagagttg
agggttgaaggaaattgggatcccaccgcaatcccatccctggctgatcaggacacacaa
aacaacacagaggtctcagccaagaaggaaacaggtgaaggcctgcacacagtagtggtg
aaggagagagtaagacgagcaacacagtcagaccacctcgacagctgcagggaccccatg
atgaagctcactttgaaggtgctctgggtcctccaccagcgtggtgtggggaagagatct
ggcctggagggcatagagagcagagatcttacgactatgtctatactacacgggttgctg
cagtacttgggcacagagctgcaggactcagaggacagcatggcaggacagcatgcgaag
gccatatgggcatcagactggaaagggttagtctccaagatggagtgcagcactggtaag
actgaggcacaggagtatccagaccagccaggccatcctagaggaatacagagtgagata
actgagacaagaaataagaccaaaccagaccgctctatattaggttccaagaagaagaac
tggtgttacctcagccaagaggctgcccagctagaccgagaagacccctttaagacctgg
gaccaccccatcatgccccctagcttccctaatctaaacttggaccagttgaccctggac
agtagctgcactgccccagagaagactgtcctccgcatctactacagtcccctgtctgca
cggagagtccatctagctcatctgaggcacattaccaacactgatagaaattctactacc
agtgtaatctctgccaggcttagtacgtcccaaaactctctcactcccttatgtctgagg
gtctccgctaacttgagtgacgacatgaaagagatgacagctagcttacgacaggcagtt
cactccagttcgccggagaggaggaaggggagggtgattgtgagtgggggatggacagtg
gacgtggccaccacagggactcagacccagatgcacccacagatggtgagtgtgggtcta
cagacggatgggccctacagtgtaatagcagtgagaggcaaccctttacgcctctctgcc
cgcactcaacagatctcgacttcccttgagaggctcccagggaggactgagaggttcaag
tcaggctccacctccccaaaaatgtaccgcagatactctgcctctgcttcatcttcatcg
tccatctctccttcctccacaactggtttcacctccaactcctccacctcctcctctgcc
agtcctggcagtgagggtgttttgtggagcctttcccatcggggtcctgctgggccaacc
tgggcccgccccatcaatcccagagctggtccaaggcttattcaccatagcacaataaac
agtgaattgagcagtggagggaacaacactaaacccaccagaaaacctggtggtgccaac
cggtacggcctagtcacagagttcttgcgcaaaatgagtggtcgagcagacaagccagca
caagcaacagcaccgggcggggggcagaaggggaaatgcagtccaactcataaaaccctg
gaggttgtgcccactcgtcgccctgctgcaccagtacacaggaacaacagtgtcgccagg
attgggaaccagaggttcatgaagcagagagaggaagcgtgccgtggccagaaggaggat
aactgccccagtcaggcccacagtcagaaccaggctctcagaagagacctgagcctggag
agtaaattgacactagaggatgggaactatgactgtatcagttccaagtccttgtccttc
tgctttgcccgatcatctcgccttggccctgaccaagctacagcataa
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