Oncorhynchus tshawytscha (Chinook salmon): 112216192
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Entry
112216192 CDS
T05605
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112216192
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112216192
NCBI-ProteinID:
XP_024231778
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All DBs
Position
LG16:complement(68274418..68288862)
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AA seq
970 aa
AA seq
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MVTFISSLPANCTKPLSLSLSVVSICLCASLHFSLLSVSFPTLFHSLLLVFSVPGFTDQP
GELRGFSIHICLSKGPGGFGFNIVGGSRAREFLQVYSIMPGGPGALNTADILVYINDVCV
LGTSHKEVVEMLKAVAVGHSVDMVLRRGYPMLYNTDGCLKQPHPGSTDVCDPLLPPTTTQ
PQPLHQLLPRPSTAPTQTQYHNLNGVLSHHHDVGYMGPGVGPGLDANGNATSTATRPPPS
YRHSSGNLAHSTAPSSPFYRISSGQLSDSTAFDSPSYRRSSVHPADSAEPPSYRRSRRHL
SDSTSPTPPSYRRSSGSITVTTPPVRPPRSLRDLAHLQAPDNSQSDSEVVSAIGSHRASM
IRNHNNNSLSTPPQPLRYRTSKSDLSESDLSTSSTLPVSRLPMHQSGRPRLSSSPGGGVY
SRLIRPQASLLRPPPTPDRPQIGFHSNTSGSGSHSSISSPGLMSLCSGGGVGGGGVGGGG
ELVPVALAQCEGGGDMGFSVTAGGQGGRLALIKRVWDRRQCSSLQPGDAIMKINGVDVQS
LSFAQIQRVLQEYTKQKEVILLVHRGGFHHSSISPNSIRKVTSPLLRPPPSPVASDKNPS
PPAVVLFPPRPTSTPPPPPPAMVRSSLVQSTSFLESVPVTLTMEPKDWLNAGIEDERDRG
VVVPGPGQEGGGWNRVPRGFDVELRRKPGEGFGFVIASQDVEKGKAASLLPHRFVTVRRG
SPAARSGQIRPGDRLEAVQGHSVVTLPHRELAHILRRAGNTLRLTIIPRPSTYSSSLSET
TDYDPNYTSRKGHRSRPKHDSRYYSVDLDRGQTGFGFSLRGGSEYNMGLYVLGLMEGGPA
SRSHKIQVSDQLVEINGDSTTGMTHSQAVEQIRRGGHRIYLVLKKGNGYVPDYVELSSLS
LCMTNSKLGEPCFYVIGRTENTRLVIVPVSPPFICLSTFLFSSLPMLSLQSSLLKIYYVS
LYVDILIVRP
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggtgacctttatttcctctttacctgccaattgcacaaaacctctgtcgctctccctc
tctgttgtaagcatctgtctctgtgcttctttgcacttttcactcctttccgtatctttt
cccactctctttcactccctccttcttgttttctcagtaccagggttcacagaccagcca
ggggagctgaggggtttctctatccacatatgcctctctaaaggtcccggggggtttggt
ttcaacatcgtggggggcagcagagccagggagtttctccaggtctacagcatcatgcca
gggggacctggagcactcaacacagcggatatcctggtgtacatcaacgacgtctgtgtc
ctgggaacgtctcataaagaggtggtggagatgctgaaggcagtggctgtgggccacagt
gtggacatggtcctccggaggggctaccccatgctctacaacacagacggatgcctcaag
cagccccatcctgggtcaactgatgtctgtgaccccctcctcccacctaccaccacccag
ccccagccattacaccagctcctcccccgcccatccacagccccaacccagacccagtat
cataatctcaatggcgtcctttctcaccaccatgacgtgggttatatgggtccaggagtg
gggccgggactggatgccaatgggaatgccacctccacagctacccgaccgccaccctct
tacagacactccagtggaaacctcgctcactccacggccccttcatcacccttttataga
atatccagtggacagctctctgactccactgcctttgattcaccctcctacagacggtct
agtgtgcaccccgctgactccgccgagccgccctcctacagacgttccaggcgtcaccta
tctgactccacctcccctacaccaccatcttatagacgttccagtggcagcatcactgtc
accacccccccggtccgcccaccccgctccctgagggatctcgcccacctgcaggccccg
gataactcccagagtgacagtgaggtggtctcagccatcggctcacacagggcatccatg
atccgtaaccacaacaataactccctctctaccccccctcagcccctgcgctacagaacc
tctaagagtgacctgtcagagagcgacctgtccacctcctccacactccctgtgtccaga
ctgcccatgcaccagtcaggaagaccccgcctttcatcctccccaggcggaggggtatac
tcccgcctcatcaggccccaggcttccctgctgagaccccctcccacccccgacagacca
caaatcggcttccatagcaacaccagtggcagtggcagtcacagcagcatctcgtctccg
gggttaatgagcctgtgcagcggaggtggggtcggaggaggtggggttggaggtggaggg
gagctggtgcctgtagccctggctcaatgtgaggggggaggagatatgggcttcagtgtg
acggccgggggacaggggggcaggctggccctgatcaagagggtctgggataggaggcag
tgctcctccctacagccaggggatgccatcatgaagatcaacggagtagacgtccagagt
ctcagctttgcacagatacaacgagttctccaggaatacaccaaacaaaaagaagttatc
ctattggttcacagaggaggtttccatcattcttccatctcccccaactctatacggaaa
gtcacctcaccactccttcgcccccctccttcacctgtggcctcagacaagaacccatcg
ccccctgcagttgtcctcttcccaccccgtcccacctccacccctcctccccctccccca
gccatggtgcgctcctctctggtccagagcaccagtttcctggagtcagtcccagtcacc
ctcaccatggagcccaaagactggctgaacgcgggcatagaggatgagagggacaggggg
gtggtggtcccaggaccagggcaagagggagggggatggaatcgtgtaccccggggattc
gatgtggagctgaggaggaagccaggagaggggttcggatttgtcatcgcttctcaggat
gtagagaaggggaaagctgcctccctcctccctcaccggttcgtgacggtgcgtcggggc
agtcctgcagcgaggagcggtcagatacggcccggtgaccggttggaggctgttcagggg
cattctgtggtgacccttccacaccgggagctcgcccacatcctccgcagagctggaaac
accctacgcctcaccatcatcccccgtcctagcacctactcctccagcctatcagagacc
acagattatgaccccaattacacaagcaggaaaggtcacaggtcacgacccaagcatgac
tctaggtattacagtgtggatctagaccgtgggcagacagggtttgggttcagcctgcga
gggggcagtgagtacaatatgggtctgtatgtattgggactgatggaggggggacctgcc
tcacgcagccacaaaatacaggtgagtgaccagttggtggagatcaacggggacagcaca
acagggatgacccacagccaggcagtagagcagatacgcaggggaggacaccgcatatac
ctggttctaaagaaaggcaatggatacgtccctgactacgtggagctgtccagtctgtct
ctatgtatgaccaactccaagctaggagagccttgcttctatgtcatcggccggacagag
aatacgcggttggtgatcgtccctgttagtcctccatttatttgtctctctacattcctc
ttctcctcacttcctatgttgtctttacagtcgtcgttgttgaaaatatattatgtgtca
ctgtacgtcgacatcctcatcgtgagaccatga
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