Oncorhynchus tshawytscha (Chinook salmon): 112216194
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Entry
112216194 CDS
T05605
Name
(RefSeq) leiomodin-1
KO
K22030
leiomodin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112216194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216194
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112216194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
WH2
UDPGT
Motif
Other DBs
NCBI-GeneID:
112216194
NCBI-ProteinID:
XP_024231783
UniProt:
A0A8C8D3P3
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Position
LG16:complement(68925053..68933684)
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AA seq
732 aa
AA seq
DB search
MSRRKVRNQRPAESEEDSDIDNLLAALTLAEVEELQSELTVIDPDPTVPVGLRQKNQTDK
QPSIKYNRGAMLDYCERETKKLIQRELSFEEPTTDRVKRERLKKMGKSCDSFFYFKSDDQ
DDQDVMDLNFSAVETPKEDISKDEEEKPQSKNLKGEGGSGEGNEERPHSRLGGDEDKDHE
KKEDKIVEKSNEVQVEENEKKEECINKEKGSNKTLDLISKLQTKKEDTKEKEQKDIRKKT
VSKTKDLISKLQGHADKDDTKEKEKKEKPKKMKDSKIARGIFSKVEEKQKELRGTEVMEK
RNNEKDKDSENTKSHRKPSRVQDETQIDSEKKTERTPNKNSKASNVNLENSSREERSAGE
VMEGGEGDEEASMFDELLEHVRKDDPLMTELNVNNSDVIKTHTLIQFAEALQHNTHVKTF
ALANTRADDHVAYAIAGTLRNNTSLTNVILDSNHLTGKGILAVVHALEKNVTITELRFHN
QRHICGGKTEMEMANVLRNNTRLLKLGYGFELAGPRMTMTNILSRNMDLQRQRRLEEKKQ
AQAQQSQLPQPYQPTRQTPQPQTNTKKNTLPLGKFSCEPSTQPQSKSVGETKRTGNLLKT
SPFLSPPNPSPEPFHKGSSKAVGKLNPKAWGSRSGPGSTTPPPQAGDGVSGPGSTPPPPQ
ALKAGRSGPAPPPPPAPVLEGLRKALMPASQRKLNGQTSRHGERNTRDQLLDSIRNSTLK
ALKKVDVPKLLQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaggaaagtgcggaatcaacgccccgccgagagtgaggaggactccgatatt
gacaacctgttagccgctctgacactcgcggaggtggaagagctgcagagcgaactgacc
gttattgacccggatccaactgtgccagtcggactccggcagaagaaccagacagacaag
cagccgtcaataaaatacaataggggggcaatgcttgactactgtgagcgcgaaaccaag
aaactcattcaaagggagctgtcctttgaggagccaacaactgacagagtgaaacgggaa
cgcctgaagaagatggggaagagctgtgatagtttcttctacttcaagtcagatgaccag
gatgaccaggatgtcatggacctaaacttctctgctgtggagacccctaaggaggacata
tccaaggacgaagaggaaaaacctcagagcaagaacttgaagggtgagggagggagtgga
gagggaaatgaggaaaggccacatagtaggttagggggagatgaggacaaagaccatgaa
aaaaaggaagataagattgttgaaaaaagcaatgaagtacaggttgaagaaaatgagaaa
aaggaggagtgcataaacaaggagaagggtagtaacaaaacacttgatcttatctcaaaa
ttacaaacaaaaaaagaagatacaaaagaaaaggagcaaaaagatatcagaaaaaagaca
gtctctaaaaccaaggatctgatttcaaagcttcaagggcatgctgataaagacgatact
aaggagaaagagaagaaagaaaaacctaaaaaaatgaaggatagcaagatcgcaagagga
attttctctaaagtagaggaaaagcagaaagaactcaggggtactgaggtgatggaaaag
aggaataatgagaaggacaaagatagcgaaaacaccaaatcacacaggaaaccaagtaga
gtccaggatgagacacagatagacagtgaaaagaagacagaaaggactcctaataaaaac
agtaaagccagcaacgtaaacctagagaacagtagtagggaagaacgctcagctggtgaa
gtcatggagggaggcgagggggacgaggaggccagcatgtttgatgagctcctggagcat
gtcagaaaagacgaccctttaatgactgagctcaatgtcaacaactcagacgtcatcaag
acccacaccctcatccagtttgcagaggcactacaacacaacacacatgtcaagacgttt
gctttagccaacacccgagctgacgaccatgtggcttatgccattgctggcactctgcgg
aacaacacgtctctgaccaacgtcatccttgactccaaccacctcactggcaagggaatt
ttggccgtggtacacgccttagagaaaaatgtaaccatcactgaactgcgcttccacaac
cagcgacacatctgtggaggcaagacagagatggagatggccaatgtattgagaaacaac
accaggttgctgaagctgggctacggctttgaactggccggcccaaggatgaccatgacc
aacatcctgagtcggaacatggacctgcagaggcaacgtcgactggaggagaagaaacaa
gcacaagcccagcaatcccagctgcctcagccataccagccaacacgtcagacaccacaa
ccacagaccaacacaaaaaagaacacattgcctttggggaagttttcttgcgaaccttca
actcaaccccaatccaagtctgttggtgagactaagaggacaggaaacctcctgaaaaca
tcgccctttttgtccccccctaacccctcacctgaacccttccacaaggggagctccaaa
gctgtgggtaagctaaaccctaaggcttggggtagtaggtctggaccagggtctacaaca
cctccacctcaggctggggatggtgtatctggtcctgggtctacaccacctccacctcag
gctcttaaggctggccgatctggaccagctccacctcctccccctgccccagtgttggag
ggcctaaggaaagccctcatgcctgcctcacagagaaaactcaacgggcagacttcacgc
cacggagagaggaacactagggaccagttgctggactccattcgcaacagcacactgaaa
gctctaaaaaaggttgatgttccaaagctgcttcaataa
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