Oncorhynchus tshawytscha (Chinook salmon): 112216195
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Entry
112216195 CDS
T05605
Name
(RefSeq) YTH domain-containing family protein 1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112216195
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112216195
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Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
112216195
NCBI-ProteinID:
XP_024231784
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Position
LG16:68660357..68667426
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AA seq
614 aa
AA seq
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MSATSIDPQTSKGQDAKVFPVSVQNGSLHQKETVHDNDFEPYLSGQSNQNNSYQSMTDPY
LSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLGSSI
YPHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSDTL
SKAPGMNSLEQGMLGLKMGGDVSGSGSGVKSVSSVIGGSGAVAQAVATGNGGTPIGMPPP
KPTSWAAIASKPARPQLLKAKAKPGMPMGGALPPPPIKHNMDIGTWDNKGPISKVAPPLP
PHHHHQQLHSHSHAHLPHGLPPPPQQSIQSAQSLVQQMTMGPPPPQSYQNHNLGPSPQTR
WVAPRNRNPGYGGGSMDSSGSSSVGGVGNGGGVPPGSGSGLENHPVLEKLRAAHSYNPKE
FDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAIGAKGPVYLLFSVN
GSGHFCGVAEMLSPVDYGTSAGVWAQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKP
VTNSRDTQEVPLEKAKQVLKIIVGFKHTTSIFDDFSHYEKRQEEEEVVRKTYEPIPIQRG
SRLDQEHQNRSKPQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaagtattgaccctcagacttcaaaaggacaagacgctaaagtctttccg
gtttcagtgcaaaatggctcactccaccagaaggaaactgtccatgataacgactttgag
ccctatctctctggccaatccaatcagaacaacagctaccaatccatgactgacccttac
ctgtccagctactatgccccctccattggatttccctaccctcttagcgaggccccttgg
tccaccggtggcgacccccctatcccttacctgactccctatgcgcccctcagcaatgga
gaccaccacttcatgcatgacactgtgtttggccagcctgggggacttggcagcagcatc
tacccgcataggtttaactttttccctgagaacccggccttctccgcgtggggtaccagt
gggtctcaaggccagcagactcagagttcagcctatgggggcagctacagctaccctccc
agctccctggggggcacactagtccctgatggccaaacagggttccacagtgacactctg
agcaaggcaccaggtatgaacagccttgaacaagggatgctggggctgaagatgggtggg
gatgtgtctggcagtggctcaggtgtgaagagcgtgagttctgtgatcggcggcagtggt
gctgtagctcaggctgttgctacaggcaacggtggaacaccaattggcatgccccctcct
aagcccacatcctgggccgctatcgccagcaaaccagccaggccacagctgctgaaggcc
aaggccaagccgggcatgcccatggggggagctctgccacctccgcccatcaaacacaac
atggacattgggacatgggataacaaggggcctataagcaaagtggcccctccgctgccc
ccccaccaccaccatcagcagctccactctcatagccatgcccaccttccccacggtctc
ccccctccccctcagcagtccattcaatctgcccagtcccttgtgcagcagatgaccatg
ggcccgccccctccacagtcataccagaaccacaacttaggcccgtcccctcagacccgc
tgggttgccccacgcaaccgtaatccaggctacggagggggcagcatggacagcagcggt
tcctctagtgtcgggggtgttgggaatggagggggtgttcctccaggttctggctcaggt
ctagagaaccaccctgttctggagaagctacgggctgcccacagctacaaccctaaggag
tttgactggaacctgaagaacggccgcgtgtttatcatcaagagctactctgaggacgac
atccaccgctccataaagtactccatctggtgcagcacagagcacggcaacaagcgtctg
gactcagcctttcgtgccatcggtgccaaaggccctgtctatctgctgttcagtgttaat
ggcagtgggcacttctgtggcgtggcagagatgctctcgcccgtggattatggcaccagt
gctggcgtctgggcgcaggacaagtggaaaggcaagtttgacgtggattggctgtttgtg
aaggacgtgcccaatagccagctgaggcacatcaggctggagaacaatgacaacaagccg
gtgaccaactccagggacactcaggaggtccctctggagaaggccaagcaagtgctgaag
atcattgtgggcttcaaacacaccacctccatctttgatgacttctcccactatgagaaa
agacaggaggaagaggaggttgtcagaaagacctatgagccaattccaatacagcgaggg
tcccgacttgatcaggaacaccaaaaccgaagtaaaccacaatag
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