Oncorhynchus tshawytscha (Chinook salmon): 112216270
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Entry
112216270 CDS
T05605
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112216270
09143 Cell growth and death
04210 Apoptosis
112216270
09144 Cellular community - eukaryotes
04530 Tight junction
112216270
04540 Gap junction
112216270
09142 Cell motility
04814 Motor proteins
112216270
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112216270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112216270
03036 Chromosome and associated proteins [BR:
otw03036
]
112216270
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216270
04147 Exosome [BR:
otw04147
]
112216270
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112216270
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112216270
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112216270
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112216270
Exosomal proteins of other body fluids (saliva and urine)
112216270
Exosomal proteins of colorectal cancer cells
112216270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112216270
NCBI-ProteinID:
XP_042153971
LinkDB
All DBs
Position
LG02:37872338..37882108
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAERAYHEQLSVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccatgtgggtcaggctggtgtccagattggcaatgcctgc
tgggagctctattgtctggagcacgggatccagccagatggtcagatgcccagtgacaag
accatcggaggaggagacgactccttcaacaccttcttcagtgagactggagctggcaag
catgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgaact
ggaacttaccgccaactcttccatcctgagcagctgatcactgggaaggaagatgcagcg
aacaactacgcccgtgggcattacaccatcggcaaagagatcatagacttggttttggac
aggactcgcaaactggctgaccagtgcactggccttcagggcttcctggtcttccacagc
tttggaggtggcaccggttctggtttcacctccctgttgatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctcaatctacccagctccccaggtgtccacagct
gttgttgagccctacaatgccatcctgaccacccacaccaccctggaacattcagactgt
gctttcatggtagacaatgaggctatctatgacatctgccgtaggaacctcgatatcgag
cgtcccacctacactaatcttaacaggttaatcagccagattgtgtcctccatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagactaacttggtg
ccctatccccgtatccacttccctctggccacctatgccccagtgatctcagcagagagg
gcttaccatgagcagctctctgtgtctgagatcaccaatgcttgctttgagccatgtaat
cagatggtaaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgctattgcagaggcctgggcccgccttgaccacaagtttgacctgatgtatgcc
aagcgtgctttcgtgcattggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaagattatgaggaagtgggtgtcgactccatt
gagggagagggagaggaggagggagaggagtattaa
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