Oncorhynchus tshawytscha (Chinook salmon): 112216284
Help
Entry
112216284 CDS
T05605
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112216284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216284
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112216284
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112216284
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112216284
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112216284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
BAR
PH_11
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
112216284
NCBI-ProteinID:
XP_024231933
LinkDB
All DBs
Position
LG16:71847859..71939277
Genome browser
AA seq
848 aa
AA seq
DB search
MTVDFEECVKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKQFDRMREDMEIAQVKNAQAPRNKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
ATIQQRTLMQDFSYDDSKAELFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLV
YQKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPNKSCMLQAESEKLRLAWIQAVQ
ASIASAYRESPDYHYIECLDRTASPSVSSIDSASEPRERSVRGETILHRIQCLPGNEYCC
DCGQADPHWASINLGILLCIECSGIHRSLGVHCSKVRSLMLDSWEPELLKLMCELGNSVI
NHIYEGACEAQGLKKPGPSSSRQEKEAWIKSKYVEKKFLKKLGATEVLVNGGRKTEHRWS
VKKWQRHNSATTVPKTRRKYRQEPGSASPATLSSAASALERKFRRESLFCPDELDNLFSY
FDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEVSEDSSGEAEMEPET
ETQSDPEDGRELHPGALLYKASQARNLPVMAEALAHGAEINSVNDEDDRKSPLIQAVFGG
SLIACEFLLQNAADVNQRDARGRGPLHHATYLGHTGQVCLFLKRGATQNDGDEDGQDPLS
IAVQAANADIVTLLRLAKMNEEMRESEGPFGQPGDTTYLDIFREFSHMASHNPEKLKRRS
VHFRHSFR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtgtgaaagattcaccccggttcagggcaaacattgat
gaagtggagacggaggtggtagagattgaagctaaactagacaagctggtgaagctatgc
agtgggatgatcgaggcagggaaggcgtatgtcagtgccaacaaactctttgtgaatgga
atccgggacctgtcccaacaatgcaagaaggatgagatgatctcggagtgcctggagaag
tgtggggagagcctccaggaaatagtcaactaccacatgattctgttcgatcaagcccag
agatctgtgaagcagcagctgcacaactttgtgaaagaggatgtccgtaagttcaaggag
accaagaagcaatttgaccgcatgcgtgaggacatggagatagcccaggtgaagaacgcc
caggctcccaggaacaagccccacgaggtggaggaggccaccggaacactcagtatcacc
aggaagtgcttcagacacctggccctcgactacgtacttcagatcaacgtccttcaagcc
aagaagaagtttgagatcctagatgctatgctgtccttcatgcatgcccagtactccctc
tttcagcagggctacaacctgctggatgagattgacccctacatgaagaagctggctgct
gagttggatcagttggtgattgactcggccatggagaagagggatatggaacacaagcac
gccaccatacagcagaggaccctcatgcaggacttctcgtatgacgactcgaaggcagag
ttgttcaacgtggacgcgcccaatggtgtggtgatggaggggtacctgtttaagagagcc
agcaatgcctttaagacgtggaacaggcggtggttctccatccagaacagtcagctggtc
tatcagaagaagctgaaggattccctgacggtggtggtggaggacctcaggctgtgctct
gtcaagccctgtgaggacattgagaggaggttctgcttcgaggttgtctcccccaacaag
agctgtatgctgcaggcggagtcagagaagcttcggctagcctggatccaagcagtgcag
gccagcattgcctcagcatacagggagagcccagactaccactacatcgagtgtctggat
aggacagcctcaccttccgtcagcagtatcgactcggccagcgagcctcgggaacgcagt
gtcaggggggagaccatcctgcatcgtatacagtgcctcccgggcaatgagtattgctgt
gactgtggccaggccgacccgcactgggcctccatcaacctgggcatcctgctctgcatc
gagtgctccggcatccacaggagtttgggggttcactgctccaaggtgcgctctctaatg
ttggactcatgggaacctgaattactaaagctgatgtgcgagctgggaaacagtgtcatc
aaccacatctatgagggagcatgtgaggcacagggcctgaagaaaccagggccctcaagt
tccaggcaggagaaggaggcgtggatcaaatcaaagtatgtggagaagaagttcctgaag
aagttgggggccaccgaggtgcttgtgaacggtgggcggaagacggagcaccggtggagt
gtgaagaagtggcagagacacaacagcgccaccacagtgcctaagacccgacggaaatac
cgtcaggagccgggcagcgcctcccctgccaccctctcctcagccgcttcagctctagag
agaaagttccgacgagagtcactgttttgtccagacgagctggacaatctcttctcttac
ttcgacacaggatctggacctcgtagccctgcaggtctgagcagtgacagtggcctgggc
ggcagtacagacggcagcacagatatcctggtgttcggctcagtggtggacagtgttaca
gaggaggagtgtgaggtgtcagaggactctagcggagaggctgagatggagccagagacc
gagacccagtcggacccagaggatgggcgtgagctccaccctggggcgctgctctacaag
gcctcccaggcacgcaacctgcccgtcatggctgaggcactggcccacggggctgaaatc
aactccgtcaacgacgaggatgatcgcaagagcccactcatacaggctgtgtttgggggc
tccttgatagcctgcgagttcctgctccagaatgcagctgacgtcaaccaaagagacgca
agggggagggggccactacaccacgccacatatctgggacacacagggcaggtgtgtttg
ttcctgaagagaggagccacgcagaacgacggggacgaggatgggcaggaccctctgagt
atcgctgtgcaggcagccaatgcagacatcgtcaccttgttgcgactggccaagatgaat
gaggagatgcgggagtcagagggaccgttcggccagccaggagacactacttacctcgac
atcttccgagagttttctcacatggcctcccacaacccagagaagctgaagcggaggagt
gtacattttagacactcattcaggtag
DBGET
integrated database retrieval system
