Oncorhynchus tshawytscha (Chinook salmon): 112216301
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Entry
112216301 CDS
T05605
Name
(RefSeq) protein timeless homolog
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112216301
03400 DNA repair and recombination proteins [BR:
otw03400
]
112216301
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
112216301
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
112216301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
TIMELESS_C
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112216301
NCBI-ProteinID:
XP_042153937
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Position
LG02:complement(37795757..37827017)
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AA seq
1255 aa
AA seq
DB search
MDLYVMNCELLATCSALGYLEGDTYHKEPDCLESVKDLIRYLRHEDDTRDTRQQLGAGQI
LQNDLLPIITQHSQDKSLFDACIRLMVNLTQPALLCFGKVPDDPTVRHHFLEVVSYLQAY
KEAFANEKVFGVLSETLYTLLQLDWEQRQEEDNLLIERILLLVRNVLHVPADPYEEKNVD
DDASVHDKLLWAIHMSGLDDLIKFLASAQSEQQWSMHVLEVISLMFRDQTPELLVSAGQA
RSAQEKQRDAQELEALRQKEQAEKRSRTLQRGTRHSRFGGSYVVQGLKSIGEKDVIYHRG
LHNFKNYTHDEGKAVRRVPKRKLHARDSEGKRRSALNVRLFLREFCMDFLENCYNRLMYL
VKEGLIREQAQQHDETYYLWALSFFMAFNRGNGFRADLVSETMSIRAFHFIERNITNYYE
MMLNDRKEASSWSRRMHLALKAYQELLLTVNEMDRSRDEDIRQSANVIKSNIFYLMEYRE
IFLTLLRKFDETKQPRTFLRDLVESTHLFLRMLERFCKGRNNLVVQRKRVKRKKSKGRKN
PTAAETTPEELEETWRAVAEELRATSFQLSEALTERAVPFDAASETPLEEQRTEAMVRVQ
DTLLNRRGPEALGLLRAAREVWPEGDVFGSADVEPEEELELLKQILIANLPRPPPPEPGM
EEEDGELEEEEELESVRVSETEFNFLDFIKRFANPNVVRPYLLLLRSYSQNSPHTNHCIT
RMLHRLAVDLKMDALLFQLSVFCLFNKILGDPAATAYKELVTFAKFVLNRFFALAAKNNK
AFVELLFWKSVGAAREMTEGYSKPGEGEGSNKKAKWTPEEEDELRTLYEEHRDSEVPDIV
ETLLPLLSNTTRTRRQVVAQLVAMGLVDSVKELKKQRKGTRIVLWTEEQEEELQMLFEEF
RDSDDVLGNILKKVTAKRSRARMVEKLLSMGLVSDRRELHKKRRRNPNAPGKSAAMGMTE
EEFLAHLPGGLTEEPMEGEEEVEEDEEDEEESEGEERERQAPAARGRKSWMAERESMVEK
NASLRTMVYTLRQEGMSGPLLWLQNCLNRTADHREEEGLFQPVPIVPLTEENEDAMEKKS
FQRLLRKIGVRAPADEQESFWRIPAQMRPSQLRGAAEVLSPSQDALAAGAEESEQPTPGS
PIQEQQQGEADSHEQRTQALRALLLARKMKQPSASAEHTDFTPVEDSDGAPQRSSEKKTS
TKRSRVVLDSDEDEEDSPLTMDLGANGGADSDREAHSAPAKRKRQRVLIDDDEDD
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtacgtgatgaactgtgagcttttagcaacgtgcagtgccctcgggtacctg
gaaggagacacctaccacaaagaacctgactgtctagagagtgtgaaggacctgatccgg
tacctgcggcatgaggatgatacgcgggacacccgtcagcagttgggggcgggccaaatc
ctccagaacgacctgctgcccattatcacccagcacagccaggacaagtccctgtttgac
gcctgcatcaggcttatggtcaaccttacccaacctgcactgctctgcttcgggaaagtc
ccagatgaccccactgtcagacatcacttcctggaagtggtatcctatttacaggcctat
aaggaggcttttgccaatgaaaaggtgtttggagttctgagtgagaccctgtacaccctg
ctgcaactggactgggagcagagacaggaggaagacaacctgctgattgagaggattctg
ctgctggtcaggaatgtactgcatgtccccgctgacccctacgaggagaagaatgtggat
gatgatgccagtgtgcatgacaagctgctgtgggccatccacatgagtggtctagatgac
ctgatcaagttcctggcctctgcacagagcgagcagcagtggagcatgcatgtgctggag
gtcatctccctcatgttcagagaccagacgccggaactcctggtgagtgcgggtcaggct
cgttcagctcaggagaaacagagagatgcccaggagctggaggcactacgacaaaaagag
caagcggagaaacgcagccgcaccctccagagaggaacccgacactctcgctttggaggc
tcgtatgtggttcagggactcaaatccattggcgagaaagatgtgatctaccaccgaggc
cttcacaatttcaagaactacacccacgatgaaggcaaggcggtgagacgtgtgcccaag
cggaagctgcacgctcgagactctgagggcaaacgccgctcggccctcaacgtgcgcctc
ttcctgcgcgagttctgcatggacttcctggagaactgctataatcgcctcatgtacctg
gtcaaggagggactgatcagggaacaggcgcagcagcacgacgagacctactacctatgg
gctctcagcttcttcatggcctttaaccgcggcaacggtttccgtgctgacctggtctcc
gagacaatgtccatccgtgccttccacttcattgagcgcaacatcaccaattactacgag
atgatgctcaacgaccgcaaggaggcctcgtcctggtcccgtaggatgcacctggctctg
aaggcgtatcaggagctgctgctgacggtgaacgagatggaccgctcccgagacgaggac
atcagacagagcgcgaatgtcatcaagagtaacattttctacctgatggagtacagagag
atcttcttgaccctgctgaggaagtttgatgagacaaagcagccgcgcacattcctcagg
gacctggtggagtccacccacctcttcctgcgcatgctggagcgcttctgcaagggacgc
aacaacctggtggtgcagaggaagcgtgtgaagcgtaagaagtctaagggccggaagaat
ccgactgcagcagagaccacccccgaggaactggaggagacgtggagggccgtggcagag
gagctgagggccactagctttcagttgtcggaggctctgacagagcgcgctgtgccattt
gacgctgcgtctgagactcccctggaggagcagaggactgaggccatggtgcgtgtccag
gataccctgctcaacagacggggccctgaggctctgggcctgctacgagccgcgagggag
gtgtggccagagggagatgtgtttggttcagctgatgtggagccagaggaggaactggag
ctcctcaaacagatcctcattgccaacctgcccaggccacctccccctgaacctgggatg
gaggaggaggatggcgagttggaggaggaggaagagctggagtctgtacgcgtgtctgag
acggagttcaacttcctggacttcatcaagaggtttgccaaccccaacgtcgtacgtccc
tacctgctcctgctccggtcttactcccagaactctccccacaccaaccactgcatcaca
cgcatgctgcaccgcctggccgtcgaccttaagatggacgccctgctcttccagctttct
gtcttctgcctcttcaacaagatcctaggagaccctgccgccactgcctataaggagctg
gtgacctttgctaagtttgtgctgaaccgtttctttgccctggcggctaaaaacaacaag
gcttttgtagagctgctcttctggaagagtgtgggagctgcccgcgagatgacagagggc
tacagcaagcctggagaaggagaggggtctaataagaaagcaaaatggacgccagaggaa
gaggatgagctgcgaacactctacgaggagcaccgcgactctgaagtgcctgacattgtt
gagactctgctgccgttgcttagcaacaccacccgtacacgtcggcaggtggtggcccag
ttggtggcgatgggactggtggacagtgtaaaagaactgaagaaacagaggaaaggcact
cgtattgttctgtggacagaggagcaggaagaagagctacagatgctgtttgaggagttc
agagactccgatgatgtgctggggaacatcctgaaaaaggtgacggctaaacgttcccgg
gcccgcatggtggagaagttgctcagcatgggcctggtctctgatcgacgggaactccac
aagaagagacggcgcaaccctaacgctccggggaagagtgccgcgatgggaatgactgaa
gaagagttcctggctcatctccctggaggtctaaccgaagagcccatggagggggaggag
gaggtggaggaggatgaagaagacgaagaagagagcgagggggaggagcgggagagacag
gctccggcagccagagggaggaaaagctggatggcagagagggagagcatggttgagaag
aatgccagtctgaggaccatggtgtacactctacggcaggaaggtatgtcaggacccctg
ttgtggctacagaactgcctgaacagaacggcagatcaccgtgaggaagaaggcttgttt
cagcccgtgccaattgtccctctgactgaggagaacgaggatgccatggagaaaaagagc
tttcagaggttactacggaaaataggggtccgagcaccagctgatgaacaggagtcattc
tggaggatcccagcccagatgagaccatcccagctgaggggagcggcagaggtccttagc
cccagtcaggatgccctagcagcgggggcagaggagtcggaacagccaaccccagggagc
cccatccaggaacagcagcagggggaggcagactctcacgagcagagaacccaggccctc
cgagccctgctgctggcccgcaagatgaaacagccctctgcctcagcagaacacacagat
ttcacacctgttgaggattcagacggtgcacctcagagatcttcagagaagaagacctcc
accaagagaagccgagtggtgttggacagtgatgaggatgaagaggactctcctctcact
atggacctgggggcaaacgggggcgctgactcagacagggaggcgcactccgcccctgcc
aagcgcaaacgacagagggtcctgattgacgatgatgaagatgattag
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