Oncorhynchus tshawytscha (Chinook salmon): 112216326
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Entry
112216326 CDS
T05605
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04517
IgSF CAM signaling
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112216326
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112216326
09143 Cell growth and death
04210 Apoptosis
112216326
09144 Cellular community - eukaryotes
04530 Tight junction
112216326
04540 Gap junction
112216326
09142 Cell motility
04814 Motor proteins
112216326
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112216326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112216326
03036 Chromosome and associated proteins [BR:
otw03036
]
112216326
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216326
04147 Exosome [BR:
otw04147
]
112216326
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112216326
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112216326
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112216326
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112216326
Exosomal proteins of other body fluids (saliva and urine)
112216326
Exosomal proteins of colorectal cancer cells
112216326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112216326
NCBI-ProteinID:
XP_024232000
LinkDB
All DBs
Position
LG16:complement(73621383..73625476)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMSCCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKIGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAE
AREDMAALEKDYEEVGRDSGEGDEDGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccgtccacgtgggtcaggctggagtccagattggaaatgcctgc
tgggagctctactgcctggagcatgggatccagccagacggacagatgcccagtgacaaa
accatcggtggaggagatgactccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggagcccacagttattgatgaggtgcgcact
gggacctatcgccagttattccatcctgaacagctcatcactggcaaagaggatgctgcc
aacaactacgctcgtggacactacactattggcaaagagatcatcgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggccttcaaggcttcctggttttccacagc
tttggaggtgggaccggctctggtttcacttccctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcctacttacaccaacctcaacaggctcattagccagatcgtttcctccatcacggct
tcccttcgatttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctctggccacctatgccccagttatttctgcagagaag
gcttaccatgagcagttaactgtctctgagatcaccaatgcctgctttgaaccagccaac
cagatggtgaaatgtgaccctcgtcacggcaagtacatgtcatgctgccttctataccgt
ggtgacgtggtgcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgttcc
attcagtttgttgactggtgtccaactggtttcaagattggcatcaactatcagcctccc
actgtagtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagtttgctgag
gccagagaggacatggcagccctggagaaggattatgaagaggtgggacgtgacagcggt
gaaggagatgaggacggggaagagtattag
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