Oncorhynchus tshawytscha (Chinook salmon): 112216327
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Entry
112216327 CDS
T05605
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112216327
09143 Cell growth and death
04210 Apoptosis
112216327
09144 Cellular community - eukaryotes
04530 Tight junction
112216327
04540 Gap junction
112216327
09142 Cell motility
04814 Motor proteins
112216327
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112216327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112216327
03036 Chromosome and associated proteins [BR:
otw03036
]
112216327
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216327
04147 Exosome [BR:
otw04147
]
112216327
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112216327
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112216327
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112216327
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112216327
Exosomal proteins of other body fluids (saliva and urine)
112216327
Exosomal proteins of colorectal cancer cells
112216327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112216327
NCBI-ProteinID:
XP_042155548
LinkDB
All DBs
Position
LG16:73628627..73635672
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGSGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccgtccatgtgggtcaggctggagtccagattggcaatgcctgc
tgggagctctactgcctggagcatgggatccagccagacggacagatgcccagtgacaaa
accatcggcggaggagatgattccttcaatacctttttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggaacctacagttattgatgaggtgcgcact
gggacctatcgccagttattccatcctgaacagctcatcactggcaaagaagacgctgcc
aacaactacgctcgtggacactacactattggcaaagagatcatcgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggccttcagggcttcctggttttccacagc
tttggaggtggctccggctctggtttcacctccctgctgatggagcgcctgtctgttgac
tacggcaaaaagtccaagctggagttctccatctacccagctccccaggtgtccacagct
gtggtggagccctacaactctatcttgaccacccataccaccctagagcactctgactgt
gccttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcctacttacaccaacctcaacaggctcattagccagatcgtttcctccatcacggct
tcccttcgatttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctctggccacctatgccccagttatttctgcagagaag
gcttaccatgagcagctctctgtctctgaaatcaccaatgcctgctttgaaccagccaac
cagatggtgaaatgtgaccctcgtcatggcaagtacatggcttgctgccttctattccgt
ggtgacgtggtgcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgttcc
attcagtttgttgactggtgcccaactggtttcaaggttggcatcaactaccagcctccc
actgttgtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagccctggagaaggattatgaagaggtaggggttgactccatt
gagggtgagggagaggaggagggagaagagtattga
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