Oncorhynchus tshawytscha (Chinook salmon): 112216343
Help
Entry
112216343 CDS
T05605
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216343
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112216343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112216343
NCBI-ProteinID:
XP_024232024
UniProt:
A0A8C8D1W6
LinkDB
All DBs
Position
LG16:complement(73986361..74001856)
Genome browser
AA seq
710 aa
AA seq
DB search
MAIAPFSRSQWASHSLRVTAKELSIVGTRGRNNAIAERFSKYQLAAEEGNSERKKAAADP
LPPTLRSGNLSVLKKWWEQPVQSATSCAPLPHTTHTRCLLPLNPKAKHQNQPQATQAQPP
LSPDPDTSPTAAEDQAGPGMERRLQQRDPERQEAVEEVPCVPSEKPNIPLNNLKMMFEKG
ENQQNKVSRAPVRIGDITDNMDQLLGDAGSMESMPLRDRMAMYQAAVSKTEVLSSSVSSD
QLDSGLLCSNKQKENVPPGSGVMGSDSEPNSRKASSTESNAGSSIGTSSVSSTQNDQAQP
KNPRSFCLPAQESCVSCQKTVYPLERLVANQQVYHNTCFRCSHCNTKLSLGTYASLHSLV
YCKPHFCQLFKAKGNYDEGFGLRPHKELWETKGESGAGEEQRTEQTTEVTSFSKDKLKKC
ASTGTLLISPAVEESPLAKVNVVTASLETRTQISTEKDKPVETRRLKISWPPRTEGDGEG
GNMGSSPTSEGSSGGRPSRAKWPPEGDSAFPDQSPESTERSTLCRSSSLKERSQPFSLAS
PSHAPAPVANPEPELLERMSSLEHREPELASSPEEQIIEIREQSDSLSPDYHTPSDDNYV
DVQTSTEEGRETPLKENHHESLESKEEQGAKEDWDEEKMEGEDGEGLPSQNCHTASSEIV
TPPSSPEVEPRPKTNHMSQDVGFWDGKEAVSVEEMIKRNRYYEEDEDEED
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgctccgttcagtcgcagtcagtgggcctcccactccctcagagtcacagct
aaggagttgtccatagttggcaccagaggcaggaacaatgccattgctgagcgcttctcc
aaataccaactggctgcagaggagggcaactcggagaggaagaaggcagctgcagatccg
ttgcccccaactctccgcagtggcaacctgagtgtgttgaagaagtggtgggagcagcct
gtccagtcagccacgtcctgcgccccgttaccccacaccacccacactcgctgcttgctc
cccttaaaccctaaagccaagcatcagaaccagccccaggccactcaggcccagccacct
ctctcaccagaccccgacaccagccccacagccgctgaggaccaggcaggacctggcatg
gagagaagactgcagcagagagacccagagaggcaggaggcagtagaagaagtaccttgt
gtccccagtgagaagcccaacatccccctgaacaacctcaagatgatgttcgagaaagga
gagaaccagcagaacaaagtgtccagagcgcctgtgaggatcggagacatcactgataac
atggaccagctacttggagatgcagggagtatggagtccatgcccctgagggacaggatg
gccatgtaccaggctgctgtgtctaaaaccgaggtgttatcctcctcagtcagcagtgat
cagttggactcaggcctcctctgcagcaacaaacagaaggagaatgtacccccaggcagt
ggggtcatgggttcggactctgagcccaacagtaggaaagcctcttccacagagagcaat
gcaggctccagtatcggcacctcctctgtatcctcgacccagaatgatcaagctcagccc
aagaaccccaggagcttctgcttgcctgcacaggagagctgtgtgtcgtgtcagaagacc
gtctaccctctggagagactcgtggccaaccaacaggtctaccacaacacctgcttcaga
tgctcccactgcaacaccaaactcagcctgggaacctacgcctctctgcacagccttgtc
tattgcaagcctcacttctgtcagctgttcaaggccaagggcaactatgatgagggcttc
ggcctacgccctcacaaggagctgtgggagaccaaaggagagagtggggctggggaggaa
cagcggaccgaacagaccacagaggtcacctccttctccaaagacaagctgaagaagtgt
gcctctactggcacactgttgatcagcccagcagtagaggagtctccactggcaaaggtc
aatgtggtaacagcctccctagagacccgtacccagatctccacagagaaggacaagcca
gtggagacacgtcggctgaagatttcctggcctccccgcaccgaaggagatggagagggg
ggtaacatggggtccagccccacctcagaagggagctccgggggcagaccatcccgtgcc
aagtggcccccagagggtgactcggccttccccgaccagagcccagagtccaccgaacgc
tccaccctctgcaggagctcctccctcaaagagcgcagccagcccttctcattggccagc
ccctcccatgctcctgcccctgttgccaatcctgagccagaactgctggagaggatgagc
tcattggagcacagggagcctgagctggcctccagtcctgaggaacagatcatagagatc
cgggaacaatctgacagcctgtcacctgactaccacacaccttctgacgacaactatgtt
gatgtccaaaccagcactgaggagggtagagaaacacctctaaaagagaaccaccacgaa
tcactagagtcaaaagaagaacagggagcgaaggaggactgggatgaagaaaagatggag
ggagaagatggggaagggttaccttctcaaaactgccacactgcctcgtcagagatcgtc
acgcccccctcgtctccggaggtggagcctagaccaaagaccaaccacatgtctcaggat
gtgggcttctgggatggcaaggaggccgtgtctgtagaggagatgattaagaggaaccgc
tactatgaggaagatgaggacgaagaggactga
DBGET
integrated database retrieval system
