Oncorhynchus tshawytscha (Chinook salmon): 112216366
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Entry
112216366 CDS
T05605
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
otw04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112216366
04114 Oocyte meiosis
112216366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112216366
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112216366
Meiosis-specific proteins
Cohesin complex and associated proteins
112216366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
112216366
NCBI-ProteinID:
XP_024232084
UniProt:
A0A8C8EQQ3
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Position
LG16:complement(76192558..76210713)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYHEDSGEERTFTRIIIGSSSEYRINSKVVNLAEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVKAHVQMQLFKLYHNDAEIEKLNR
ELSQHNKGIDKDRKKMDHVEEELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKLYKKRKGDMDELEKEQGAVEMARQEFDDRMEEEAQS
QGQDLTLEENQVKVYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSKQSLDEQNRMEEELTEQVEGAKNRIDEINLELNQV
MEQLGDARIDRQENSRQARKAEIMDSIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFCPRINDIKRIIQSREKEVNDLRDRMNVVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKTIDETMAQLQDLKNQHLTKKSEVNDKNHQMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLCSGTMDDIGQGEGSSQQE
ESNSSQRTSSTVLAKEALIEIDYSNLSEDLKDALAEDEIKAEMHTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFEAVSTN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVNTQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSVYHEANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttgaagctaatagagatcgaaaacttcaaatcttacaagggccgacaaatc
atcggcccctttcacaaattcacggcgattattgggcccaatggatccggcaagtccaac
ctcatggatgccatcagctttgtgctggctgagaagaccagtaacctgcgtgtgaagact
ctgaaggacctgatccacggagctcccgtggggaaaccagcagccaacagagcttttgtg
agcatggtgtaccatgaggacagtggagaagagcgcaccttcaccagaatcatcattggc
tcgtcgtcagagtaccgaatcaacagtaaggtggtgaatctggcagagtacagcgaggag
ctggagaaactaggcatcctcatcaaggccaggaacttcctcgtcttccagggtgctgtg
gagtccatagccatgaagaaccctaaggagcgtacggctctatttgaggagatctcccgg
tctggggagttggctcaggagtacgaccgcaggaagaaggagatggtgaaggctgaggag
gacacacagttcaactaccaccgcaagaaaaacatcgccgcggaacgcaaagaggcaaag
caggagaaagaggaggctgagcgttaccagcgtctgaaggacgaggtggtgaaagcccac
gtccagatgcagctgttcaaactgtatcacaatgatgctgagatcgagaagctgaaccgc
gagctgtcgcaacacaacaaggggattgacaaggaccgcaagaagatggaccacgtggag
gaggaactgaaggagaagaagaaagagctggggaggatgatgagagaccaacagactgtg
gagaaagagatcaaggagaaggacgctgagctgaaccagaagcgaccccagtacatcaag
gccaaagaaaacacctcccacaagatcaaaaaactagaagcagccaagaagtccctccag
aacgcccagaagctgtacaagaagaggaagggggacatggatgagttggagaaagaacag
ggtgccgtggagatggcccggcaggagtttgacgaccgaatggaggaggaggcccagagc
cagggacaggacctcacactggaggaaaatcaggtgaaggtgtaccaccgtctgaaggag
gaggccagtaagcgggcggccactcttgcccaggagctggagaagttcaacagagaccag
aaggcagaccaggatcgcctcgacctggaagagaggaagaaagtggagactgaggcaaag
atcaagcagaagatccgtgagatagaggagaaccagaagcgtattgagaagctggaggac
tacattaccaccagcaagcagtctctggatgaacagaacagaatggaggaggagctgact
gagcaggtggagggggcaaagaacaggatcgacgagatcaacctggaactcaatcaggtg
atggagcagctaggagacgccaggatcgacagacaggagaacagcaggcaggcacgcaaa
gcagagatcatggacagcatcaagagactgtaccccggatctgtgtacggccgtctgatc
gacctgtgtcagcccactcagaagaagtttcagatcgctgtgaccaaggtgctaggcaag
aatatggacgccattatcgtggactcagagaagaccggtagagactgtatccagtacatc
aaagagcagagaggagagccagagaccttcctgccactcgactatctggaggtgaagcct
acagatgagaagctgcgtgagctgcgtggagccaagctggtgatcgatgtgatccgctac
gagccgcctcacattaagaaggccctgcagtacgcctgtggtaacgcactggtctgtgag
aatgtagaggacgctcgacgcatcgccttcggagggccctacagacacaagacggtggcc
ctggacggtacacttttccagaagtctggtgtgatctcgggtggagccagtgatctgaag
gctaaggccaggcgctgggatgagaaggctgtggacaaactcaaggacaagaaggagaaa
ctcactgaggaactcaaggagcaaatgaaggctaagaggaaggaggcagagctgcgtcag
gtccagtctcaggcccacggcctccagatgagactgaaatactcccagagtgacctggaa
cagaccaagacccgacacctctccctcaacatgcaggagaagtctaagctggagagtgag
ctggctaacttctgccctcgcattaacgacatcaagaggatcatccaatcccgtgagaag
gaggtcaatgatctgagagaccgtatgaacgttgtggaagacgaggtgttcatcgagttc
tgtaaggagattggagtcaggaacatcagagagttcgaggaggagaaggtcaagaggcag
aacgagatcgcaaagaaacggctggagtttgagacccagaagactcgtctgggcatccag
ctggactatgagaagaaccagctgaaggaggaccaagagaaggtcatgatgtgggagcag
accgtcaagaaagacgaggccgagatagagagactcaagaaggaggagcaccgccacatg
aagaccatagatgagaccatggcccagctgcaggacctgaagaaccagcacctcaccaag
aagtcagaggtcaatgacaagaaccaccagatggaagagatacgtaagaaactgggagga
gccaacaaggagctgacccagctgcagaaagaggtgacggccatcgagaccaagctggag
cagaaacgtagtgaccgccacaacctgctgcaggcctgtaagatgcaggacatcagactg
ccgctatgctctgggaccatggacgacatcggccagggagaggggagctcccagcaggag
gagtctaacagcagtcagagaacgtccagtactgtcctggctaaagaggctctcatagag
atcgactacagcaacctgtctgaagacctcaaggacgcgctggcagaggatgagatcaaa
gcagagatgcacacactgcagcagcggctcaacgagcagcagtccatactgcagaggatc
agcgcacccaacatgaaggccatggagaaactagagtctgtcagggacaagttccaggag
accagtgacgagtttgaggcggcccgtaagagagccaagaaggccaagcaggcgtttgag
cagatcaagaaggagaggtttgaccgctttaacgcctgttttgaggctgtgtccaccaac
atcgatgagatctacaaagccctgtcacgcaacagctctgcccaggccttccttgggcca
gagaaccctgaggagccttacctggatgggatcaactataactgtgtggcccctggaaag
aggttcagacccatggacaacctgtctggaggggagaagactgtagctgccctggctctg
ctgttcgccatacacagctacaagcctgccccattcttcgtcctggatgagattgatgct
gctctggacaacaccaacatcggcaaggtggccaactacattaaggaccagtcagtgaat
actcaggctatagtgatctctctgaaggaagagttctacaccaaggctgactcgctcatc
ggggtctatccagagcaaggagattgcgtcatcagcaaagtactaacctttgacctgtct
gtgtaccatgaggccaaccccaaccccaatgagtag
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