Oncorhynchus tshawytscha (Chinook salmon): 112216380
Help
Entry
112216380 CDS
T05605
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112216380
04514 Cell adhesion molecules
112216380
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112216380
09142 Cell motility
04820 Cytoskeleton in muscle cells
112216380
04810 Regulation of actin cytoskeleton
112216380
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112216380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112216380
04515 Cell adhesion molecules [BR:
otw04515
]
112216380
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112216380
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112216380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
Integrin_b_cyt
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
112216380
NCBI-ProteinID:
XP_024232106
LinkDB
All DBs
Position
LG16:complement(77726659..77738189)
Genome browser
AA seq
808 aa
AA seq
DB search
MFTSPGKSLMSPACLAEGDSRTGRQRSGCVGAIQTMRKVWLAVVVLLIHFTSLRGSMGLD
GRCLSKPTCTECLRSLGCAWCKQKDFLAQGEPDERRCDREEALRKRHCSDGQVLNPQPAI
RSRAEEPMGSGVQLEPQNLHLKLRVGMPQSFDVRFRRAEVYPIDLYYLMDLSFSMKDDLK
NIRNLGREVATAMKNITSAVRIGFGSFVDKVVEPYVSTVEAKLANPCNEGYKSPCQPAFS
FKHVLKLTEDVEEFERKVSKQSISSNLDNPESGFDAIMQVAVCQDDIGWGNATRILVYTS
DDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDTVYDYPSVGHLSQVISANNIRLIFAV
TDQHIQNYEALSEMIPQSVVGLLEDDSSNVVQLISEACNNLSSSILLEHRDVPPGLGVSY
SSHCGDDRLAQGQDRGECRDVRTNQQVNFTVTVTSSSCLSKTESFIIKVQGINEELRVTV
ETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGHTGQRCECETQPDKDTSLALETLCSP
AQTNSTGTPQCSGHGSCVCGQCICWGQHRGQHCQCDDISCNRHNNMICGGNGRCDCGNCE
CFHNYTGPACECSTLTDQCQTSNDGICSHRGQCECNECHCHPGFFGSHCTKPLAPCDAYR
ACVACMLHESAINMCHHSCGSAKPIRINGTQSFTCQDDTVRFNVELIINTGDIFVYYTDT
PRGIDPWIINMGKAVVGIVLLGVIMIIIYRLMLEVSYQRECRRFLKNKENICWEDTQNPL
FQEAKTTFTHPMHVLEPDADCATSTFGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcacctgggaagtccctgatgtccccagcctgtcttgcagaaggagattcc
agaactgggagacagagaagtggatgtgttggtgccatccagacaatgagaaaggtgtgg
ctggctgtggtggttcttctgatacacttcacttcactgagaggatctatgggcctggat
ggaagatgcctgtctaagcccacctgcactgagtgtctgagaagccttggctgtgcctgg
tgtaaacagaaggatttcctggcgcaaggggagcccgacgagcgtcgctgtgacagggag
gaggcactgagaaagagacactgctctgacggacaggtcctgaacccccagcctgcaata
cggagcagggcagaggagccaatggggagcggggtccagctagagccacagaacctccac
cttaagctaagagtcggcatgccccagtcatttgatgtgaggttcaggcgtgcagaggtt
tatcccatagacctgtactacctgatggacctgtctttctccatgaaagatgacctgaag
aacattaggaatctgggacgggaggtggccactgccatgaagaacatcaccagtgctgtc
aggataggctttggttcctttgtggataaggtggtggaaccctacgtcagtacagtggag
gccaaactggccaacccatgcaacgaggggtacaagagcccctgccagcctgccttcagc
ttcaaacatgtactgaagctcactgaggacgttgaagagtttgagagaaaggtgagcaag
cagagcatctccagtaacctagacaacccagagtcaggctttgacgccatcatgcaggtg
gctgtctgtcaggatgacattggctggggtaatgcaactcgtatcctggtctacacctca
gacgataccttccacctggcaggtgatgggaagcttgctgggatctaccaacctaacgac
gggaaatgccacctgaatagcaatgggctctataataaggacaccgtttatgactatccc
tcagttggacacctatctcaggtcatatcagccaataacatcaggctgatctttgcagtg
acagaccagcatattcaaaactatgaggcactcagtgagatgatcccccagtcggtggtg
ggcctcctggaggatgactccagcaacgttgttcagctcatctctgaggcctgcaacaac
ctatcgtcctccatcctcctggagcaccgtgacgtcccaccaggcctgggggtctcctac
agctcccactgtggtgatgacaggctagctcaggggcaggacagaggggagtgcagagat
gtcagaaccaatcaacaggtcaatttcacagttactgtgaccagctcgagctgtctgtcc
aagacagagtctttcatcatcaaagtgcagggtatcaatgaagagctgagggttaccgtg
gagacgctgtgtgactgtgactgtcaggactccgaggaacagtcatcccagtgtcatggc
aatggaacattccactgtggtatctgtagctgtgattcaggacacacaggccagcgttgt
gagtgtgaaacacagccggacaaagacaccagtctggccttagagaccctgtgttcacct
gcacagacaaacagcacaggcacaccacagtgcagcggccatgggagctgtgtgtgtggc
caatgtatctgctggggccaacacaggggccaacactgccagtgtgacgacattagctgt
aaccgtcacaacaacatgatctgtggaggtaatgggaggtgtgattgtggtaactgtgag
tgtttccacaactacacaggccctgcatgtgaatgctctaccctcacagatcagtgccag
accagtaacgatggaatctgctctcaccgaggacagtgtgaatgtaatgaatgccattgt
caccctggtttctttggcagccactgcaccaagcccctggcaccatgtgatgcataccgg
gcctgtgttgcttgcatgttacatgaatcagccataaacatgtgtcaccattcctgtggc
tctgccaagcctatccgcatcaatgggactcaatcattcacctgtcaggatgatactgta
cgttttaatgtggaactcatcataaatactggtgacatctttgtctactacacagatact
ccaagagggattgacccatggattatcaacatggggaaggcagtggtaggaatcgtttta
ctgggtgtcatcatgataataatttaccggctgatgttagaagtgtcctaccagcgggag
tgtagaaggttcctgaagaataaggaaaatatctgctgggaagatactcaaaatccactg
ttccaagaggccaagacaacattcacccaccccatgcatgtgttggagccagatgcagat
tgtgctacatcaacctttggaaaataa
DBGET
integrated database retrieval system
