Oncorhynchus tshawytscha (Chinook salmon): 112216396
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Entry
112216396 CDS
T05605
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216396
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112216396
Retrieval pathways
112216396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112216396
NCBI-ProteinID:
XP_042155683
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All DBs
Position
LG16:80356950..80382807
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AA seq
515 aa
AA seq
DB search
MATDNRIHFWRKNAKVPGSIQPVYGAQHPPLDPRIHRTFPKDTPKANNLKSKKASSFHEF
ARSTNDAWDIDDEEDEDFLAPIHPSSLPPTLLSTHQVPPLPPQQPINTTIEPDTGPGPAD
RLAPPTAEVRLQHEEANGRVVVKSSSEAQLNTNTVRSTLQKQQSLPVRPIIPLVARISDQ
NSSGAPIMTVRDKSRLDKFKYLLSCPNTDLEELRKHSWSGIPREVRPITWRLLSGYLPVN
MERRDLVLKRKRDEYFGFIEQYYHSRTDETYKDTYRQIHIDIPRTNPLIPLFQQPAVQEV
FERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVEEDVENFDVASLPLDTQRNIEAD
SFWCMTKLLDGIQDNYTFAQPGIQNKVKALEELVSRIDEDIHNYFKRYEVEYLQFAFRWM
NNLLMRELPLRCTIRLWDTYQAEQEGFSHFHLYVCAAFLIEWRKEILSMVDFQGLLMLLQ
NLPTIHWGNEEVGLLLAEAYRLKYMFADAPNHYKR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgataacagaattcatttctggaggaaaaacgcaaaggttccagggagtata
cagccagtttatggagcacagcatcctccccttgaccccagaatccaccgcacgtttcct
aaagacactccaaaggcaaataatctcaagtccaaaaaggcgtctagtttccacgagttt
gcccgcagcacaaacgatgcctgggacatcgacgatgaggaggatgaggacttcttagct
cccatccatccctcatctctcccgcccaccctgctctccacacaccaggtacctcctctt
cctccacaacaacccattaacaccaccattgagccagacacagggccaggacctgcagac
cggctggctcccccaacagcagaggtccgccttcagcatgaggaggccaatggcagagtg
gtggtgaagtccagcagtgaggcccagctcaacaccaatacagtgcgttccactctgcag
aagcaacagtctctcccagtccgccccatcatcccgttagtcgccagaatctctgaccaa
aattcatcgggggccccaatcatgacagtgcgagacaagagtcgattggacaaattcaaa
taccttctgtcctgtcctaacaccgacctcgaggagctccggaagcacagctggtcaggc
attccacgagaagtgaggcccatcacatggaggctcctctctggttacctcccagtcaac
atggagcgcagagacctggtgctgaagaggaagagagatgagtactttggtttcattgaa
cagtattaccactccaggacagacgagacttacaaagacacatatagacagatccacatt
gatattccgaggacaaacccactaattccacttttccagcagcctgcggtacaagaggtg
tttgagaggatcctcttcatctgggctatccgccatccagccagcggctacgtccaggga
atcaatgacttggtcactccattctttgtggtattcctttccgaatttgttgaggaggat
gtggagaattttgacgtagcgtccttgcctcttgacacccagaggaacattgaggcagac
agcttctggtgcatgaccaagctgctggacggaatacaggacaactacacttttgctcag
ccagggatacagaacaaagttaaagctttggaagaattggtcagcagaatcgatgaggac
atacacaactactttaagaggtatgaggtggagtacctgcagttcgcttttcgttggatg
aacaacctgctgatgagagagctgcctctacgctgcaccatacgcctctgggacacctat
caggctgaacaagagggcttctcccacttccacctctacgtctgtgctgctttcctgatc
gagtggcgcaaagagatcctctccatggtcgattttcagggtcttctcatgttactccag
aaccttcctacaatccactgggggaatgaggaagtgggccttctcctggctgaagcatac
agactcaagtatatgtttgctgacgcgcccaatcactacaaaagatag
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