Oncorhynchus tshawytscha (Chinook salmon): 112216399
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Entry
112216399 CDS
T05605
Symbol
pex10
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112216399 (pex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112216399 (pex10)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
112216399 (pex10)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_4
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
112216399
NCBI-ProteinID:
XP_042155665
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Position
LG16:79993698..80002600
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AA seq
328 aa
AA seq
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MPLVGANQPQLIRSSQKDEYYQQCLRNNANEAFQTLAGSKRWLHWRKEIQLLSDLAYYGL
TTFSGYQTLGEEYVSIIQVDPTLRRVPSRVRRGALVLLHSLFPYLLDKLLVCLENELEAG
EEESQGGGIQRATVASPWSPGAWMRGWVRRALGLLTEPQRRACVPAVLALQQGLSILHRV
HVALFYISGAFYHLGKRTAGVSYLRVHGVTGDDGNIRSSYRLLGVISLMQLALTLALQLN
NLRQRQRARQEWRQHRNLPSRSQSVDETDSPRASRCILCLEERRHSTSTPCGHLFCWECI
TEWCNTKTECPLCREKFQPPRLVYLRNY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgtcggtgcaaaccaaccacagttaattcgttcaagtcagaaggacgaatat
tatcaacagtgtctcaggaacaacgcgaatgaagctttccagactcttgcagggtccaag
agatggctgcactggagaaaagagatccaactcctgtcagacctggcatactatggttta
accacattctcagggtaccagacgttgggcgaggagtatgtcagtatcatccaagtggac
cccactctgcgcagggtaccgtcgcgcgtcagacgaggagccctggtgctcctccacagc
ctgtttccatacctgctggacaagctgctggtgtgcctggagaatgagctggaggcgggg
gaggaggagagccagggagggggaatccagagagcaacagtggccagtccttggagcccc
ggagcctggatgagaggctgggtccggagggcgttggggctgctgacggagccccagagg
agggcgtgtgtgccggccgtgttggccctccagcagggactctccattctccaccgggtg
catgtggccttgttttacatcagcggggccttctaccacctggggaagaggacggccgga
gtgagctatctgcgggtacatggtgtgactggggacgacgggaacatccggagtagctac
aggctcctgggcgtgatctccctgatgcagctggccctcacactggccctgcaactcaac
aacctccgtcagagacagagagcccggcaggagtggagacaacacaggaacctgccctcc
aggtcccaatctgtagacgagactgactctccccgtgcctctcgctgtatcctgtgtcta
gaggagaggagacactcgacctccaccccgtgtggtcatctgttctgctgggagtgtatc
acagagtggtgcaacaccaagacggagtgccctttgtgtcgtgagaagttccagcctcct
cgactagtctacctgaggaactactag
DBGET
integrated database retrieval system
