Oncorhynchus tshawytscha (Chinook salmon): 112216420
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Entry
112216420 CDS
T05605
Name
(RefSeq) 40-kDa huntingtin-associated protein isoform X1
KO
K20135
factor VIII intron 22 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216420
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112216420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
TPR_1
TPR_12
TPR_2
TPR_11
Foie-gras_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
112216420
NCBI-ProteinID:
XP_042166674
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Position
LG32:complement(16307471..16313034)
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AA seq
317 aa
AA seq
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MAAEGDFLMRYRAVSNKLKKRFLRKPNVAEASEQFGQLAKELKQQDCLQYAAFCDLAMAR
CEQTLFNAPGEALALTDAARLFLLSEKENRALQAPGFDEHLQAALNCYSFAIKVYIEMNQ
PVMAASLSLELGNALKEMNRPGEAIVHYQRAAELQTQQPIESLLSMGEMATCKILTRDYD
GALSVLTEMQLMCQERGLQLPGTSTPVGAFLDIVAKCEISRVLLLMLLEPPPQKLLPEHA
QTLERYAWESFDPQSQVTFLPENVFLLLQSVVMACQEKDTESLKSLQPELWPLLSAEQNH
LLHLVVQERITPSGQGI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagggggactttctgatgagatatcgtgctgtatcaaataaattgaaaaaa
cgttttcttcggaaacccaatgtagcagaagcaagtgagcagtttggtcagttggctaaa
gagctgaagcagcaagactgccttcagtatgcagccttctgtgaccttgcaatggcaagg
tgtgagcagactcttttcaatgctcctggggaggccctggccctgaccgatgctgcccgg
ctcttcctgctctctgagaaggagaacagagcactacaagccccaggcttcgacgagcac
ctgcaggccgcactcaactgctacagcttcgccatcaaggtgtacattgagatgaaccag
cctgtcatggctgccagtctatccctggaacttggcaatgccctcaaggagatgaacaga
ccaggtgaggccatagttcactaccagagagcagcagaactccagacacagcagcccatt
gagtctctgctgtctatgggagagatggccacctgcaaaatactcacccgtgactatgac
ggcgcgctgtccgtgctgacagagatgcagctgatgtgtcaggagaggggactgcaactg
cccggcaccagcacccctgttggtgcatttctggacattgtggccaagtgtgagatttct
agagtacttttgctgatgctgcttgagcctcctccccagaagttgttgccagagcatgcc
cagaccctggagagatacgcctgggagtcgtttgaccctcagagtcaggtgaccttccta
cctgagaatgtcttcctgctcctgcagtcagttgtgatggcctgccaggaaaaagacaca
gagtccctcaagtctcttcaacctgaactctggcctcttctctcagcagagcagaaccac
ctccttcacctggtggtgcaagagcggatcaccccctctggacaggggatttag
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