Oncorhynchus tshawytscha (Chinook salmon): 112216472
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Entry
112216472 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216472
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112216472
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112216472
Ion channels [BR:
otw04040
]
Other channels
Mechanosensitive channel (Piezo)
112216472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_RRas_bdg
PIEZO
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
112216472
NCBI-ProteinID:
XP_042154568
LinkDB
All DBs
Position
LG16:11355104..11435821
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AA seq
2762 aa
AA seq
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MLLTSALILIVFIFFPQEKKEEEVEKEEGEKEEEVELEEDDLMFEEDFETGGDGDGEMTG
DEVEEGGEGQEGDGEVEEESTKMKILRQIAAMASKVKEIIGNLITTAGKVVVTILLGLTG
IMLPSLTSAVYFFTFLGLCTWWSFCRTFHPLIFSCLCVLMAIFSAGHLVTLYLYQFQFFQ
ELIPPGDSYASLFGISSVVQTDCSHTWMFRVNPALSWHHYVNPIMLLLLYYTLATLIRLW
LQDPTDTEPGEGEGGELGEGEEPMVDDITSTAEKRREVWCMAHQTDDRNINKHPEYLLST
QDGYNTSEVLIVTSNGSPPDYVHTNGLLGLDLHSTPQNKPGQPGPDLGSVYEVVVVQGEG
LKEEMDAGAMAWATAPGEGMARANAVVTAFRFIMKQSYICALIAMMAWSITYVSWLTFVF
LIWSCTLWMVRDRRRYTMTTSPFMVFYGNLLIILQYIWSFELLQPVPGLFLKKEVPFREL
GSKMLCLLSFWLLLRQALTERKESQREEEVLSDIRVIHTHKKEDKEVMDESGGHREMMEV
LGNTLMAMLNKYWIYICGGMFFFVSFEGRIVMYKIIYMMLLLFCVACYQVHYEWWRSMLK
YFWMSVVVYTMLVLILIYTFQFDSSIHVWFNMTGMSKDKLEDLGLEKFSVPALFTRIFIP
TSFLLVCILHLHYFHQRFLLLTDIKTVADKQKSTITRLVHLDGSLADISLIKPILTVTTK
DEEAGEKVQLEEEDGKEEEEKKRSYEEEEEEEEEEKRYEEPLEHCSKAESPFDEMSDLRS
KWYLVVDRLTVLFLKFLQYFQQLQLTVWWLLELHIIKIVSSYIIWVSVKEVSLFNYVFLV
SWAFALPFGQFRPLASSVCTVWTCVIIVCKMLYQLTSINPSTYSKNCSMPLNYTDNQRSE
MAHSLLYSAPVDPANWVGLRKFSPLLENLRNNLLILALLAFEVTIYRHQDLYRMRNNLTT
PVTRTIFHDITRQHLDDSIVNGAKYFINYFFYKFGLETCLLLAVNVIGQRMDFYAMLHAF
GLIAVIYQRRRKAIADTWPKYCCFLACMLTFQYFVCIGVPPAACKDYPWRFPSSSTDSNV
IKWLYFPDFHTKPNPMFLLYDFMLLLCASLQRQVFEEEKEEAVRLLAGDNMEICRDLDST
SFSQHNPVPDFIHCRSYLDMLKVIMFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFL
LFGGDLLLKPIKSILHYWDFLIAYNVFVITMKNILSILACGYIKSLVTNHCWLIQLFSLA
CTIKGYSKPEQQANKHCDLPSDEAGIIWDSICFAFLLLQRRVFMSHYFLHVVADIRSSQI
LASRGAELFQSTIVKAVKARIEVEKRSMDLLKRQMDRIKSRQQKFKRGKERILSLVQESG
DAGHGHSKDEEEEDEDKEMSREKKIQRWWRPWVDHASMVRSGNYYLFETDSEEEEEEDKN
EEQQPKKSAFQFVYHAWMTNSKTAMKERSKEKRRFWKKYTEGSSSKSRTEDLEEAVHVTM
EEEDQEEMKADGSDNMLKRVFNIVKFSWVLFLAMLDSFTAWINSMCQEHLDISTVLRIER
CMLTHEVNKGNKPSRESIHVYYRKQMCKAASIESGLERTEEETCQDCIPHKAESCACLES
QESMASHDSLSSAYTESTLLYSCRSTLDHTDTGPDNVQVPKTSERARPKLCKMEGLDLKS
TSSADSRGSQASEHNQCTALCSHQGTTDTIVETGEEPDQDLQDPHSSCTETPSTSTSMGL
YMEHEGVLLSRSRGLDWDSRDSVPEVKQTGLERGPCYAHHSDLQLYQADLPSTDTDIPPS
YSRATGLDREGASYSRATGLVREEAERASSIRAHHKKRLVVVTPDEKSDFLSGVRSGTFP
SLTHELTASDLLRNRMFYDEELEDSERFYGDQPALLQLLYALYNMLVAHSEMVCFLVIIL
NHMISASVATLVLPIFIFLWAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPFNQN
IELDKSKPFHPPNIIGVEKREGYVHYDLVQLLALFFHRSILKCHGLWDEDNPRGGGRETP
KQHHHEREKRTSSRPVEKQAAEGSSSLLESVRNRIPRQFHSMSTSTPLRRKSSSSASHLS
QRTVRSAHSKGDSVSSRPGLRRGHSLRRGDSLRRGDSVLSVQHRSKKEMILEKLREQLIK
AKSFTVKKTLEIYIPICQFFYNLIHPEYSAVTDVYVLMFLADTVDFIIIVFGFWAFGKHS
AAADITSSLSEDQVPEAFLVMVLIQFGTMIIDRALYLRKTVMGKVIFQVILVFGIHFWMF
FILPGVTERRFSQNTVAQLWYFVKCIYFGLSAYQIRCGYPTRVLGNFLTKSYNYLNLFLF
QGFRLIPFLTELRAVMDWVWTDTTLSLSNWICVEDIYAHIFVLKCWRMSEKRYPQPRGQK
KKKVVKYGMGGLIVMLLICIVWFPLLFMSLVKSVAGVVNKPLDVSVTITLGGFQPIFTMS
AQQNQLKDISKADFADFMNSYNYIPSAMQFLEAYTSADVAVAELEGSSNSLWTISXPSRK
NLMDVLSKEEYFPVTMSWTIQRNLSLGAKAEIATDKHITYLDMTTRQELIDLLNGTRNQA
VVIEQVFPCFLRAPSDSNAKPIEQLYKDNSYKNILLALERTHNSSGEIQEWWIVDQPSAG
QIQMRGAAVGKKREAGLQLYVFSDKVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSG
ISHSIMFEELPVVDRILKLCTDIFLVRETGELELEEDLYAKLIFLYRSPETMIKWTRDQK
TK
NT seq
8289 nt
NT seq
+upstream
nt +downstream
nt
atgttattaacttctgcgttgatactgattgtattcatcttctttccccaggaaaagaag
gaagaggaggttgagaaagaggagggggaaaaggaggaggaggttgagttggaggaggat
gacctgatgttcgaggaggactttgagacgggcggggatggagatggagagatgactggg
gatgaggtggaggagggaggagaggggcaagaaggggatggagaagtagaggaggagagc
accaagatgaagatccttcgtcagatagcggcgatggcatccaaagtcaaggagatcatt
gggaatcttattaccacggcagggaaagtagtggtcaccattctactgggccttacaggc
atcatgctgccctccctgacctctgcagtctacttcttcaccttcctgggcctgtgtacc
tggtggtccttctgtcggaccttccacccgctcatcttcagctgtctgtgtgtcctcatg
gccatcttcagcgctggtcacctggtgactctctacctctaccagttccagttcttccag
gagctcatcccacccggggatagctacgccagtctgtttggcatctcgtcggtggtccag
actgactgctcccacacctggatgttccgggtcaacccggcactgtcctggcaccactat
gtcaaccccatcatgctgctgttgctctactacaccctggccacactcatacgcctctgg
ctgcaggaccccacagacacggagcctggtgagggcgaagggggagaactgggtgaaggg
gaggagcctatggttgatgacatcacctccacagcagagaagaggagagaagtgtggtgc
atggctcaccaaacagatgacagaaacataaacaaacatccggaatatcttctttcaacc
caagacggatacaacacatctgaggttttgatcgtaacctccaacgggtctcctccggac
tatgtccacaccaacgggctgctggggctggacctgcactccacaccgcagaacaaacca
ggccaaccagggccagatctggggagtgtgtatgaggtggtggttgtgcagggtgaaggt
ttgaaagaagagatggatgcaggggcgatggcgtgggcgactgcgccgggggaaggaatg
gcgcgagctaatgcggtggtcacggccttcaggttcatcatgaagcaaagctacatctgt
gctctcattgcaatgatggcgtggagtatcacttatgtcagctggctgacctttgtgttt
ctcatctggtcctgcacgctgtggatggtgcgcgaccgccgtcggtacaccatgaccacc
tcccccttcatggtgttctatgggaacctgttgatcatcctacagtatatctggagcttt
gagctcctccaacccgtgcccgggcttttcttaaagaaagaggtgcccttccgggaactg
ggctccaagatgctgtgcctgctgagtttctggctgctgttgagacaggcgttgacagag
aggaaggagagccagagagaagaggaggtgctgtcggacatcagggtcatccatacccac
aagaaggaggacaaggaggtgatggatgagagcggtggacacagagagatgatggaggtg
ctaggcaacacgctcatggccatgttgaacaagtactggatctacatctgcggcgggatg
ttcttcttcgtcagcttcgagggacgcatcgtcatgtacaagatcatctacatgatgctg
ctcctcttctgcgtggcctgctaccaggtgcactatgagtggtggagaagcatgctgaag
tacttctggatgtctgtggtggtgtacaccatgttggtcctcatcctgatctacaccttc
cagtttgactcctccatccacgtctggttcaacatgaccggcatgagcaaggacaaactg
gaggacctgggtctggagaagttctctgtcccggctctgttcacgaggatcttcatcccc
acctccttcctgttggtctgcatcctccacctgcactacttccaccagcgcttcctcctg
ctcactgacatcaagacggtggccgacaaacagaagagcacgatcaccaggctggtgcac
ctagatggcagtctggcagatatctctctcatcaaacccatcctcactgtgaccaccaaa
gacgaggaggctggggagaaggtgcagctggaagaggaagatgggaaggaggaggaggag
aagaagagaagttatgaggaggaggaggaggaagaggaggaggagaagaggtatgaagaa
cccctggagcactgcagcaaggcggagtccccgttcgacgagatgtcagacctgaggagt
aagtggtatctggtggtggaccgcctcacggtgctcttcctcaagttcctgcagtacttc
cagcagctgcagctgaccgtctggtggctcctggagctccacatcatcaagatcgtctcc
tcctacatcatctgggtctcagtcaaagaggtgtctctgttcaactacgtgttcctggtg
agttgggcattcgccctgcccttcggtcagttcaggcccctggcctccagcgtctgtacc
gtctggacctgtgtcatcatcgtctgcaagatgctctaccaactcacctctataaacccc
tctacgtactcaaagaactgctccatgcctctgaactacacggataaccagaggagtgag
atggctcactccctgctctacagcgcccctgtggacccagccaactgggtgggtctccgc
aagttttcccccctactggagaacctgaggaacaacctgttgattctggccctgctggca
tttgaggtgaccatctatcgccaccaggacctgtaccgcatgagaaacaacctcaccacg
cccgtcaccagaaccatcttccacgatatcacccggcaacaccttgacgacagtatcgtc
aacggtgccaagtacttcatcaactacttcttctacaagttcggcctggagacatgctta
ctgttggcggtgaacgtgattggccagaggatggacttctacgccatgctccacgctttc
ggcctgatcgcagtcatctaccaacggcgccggaaggccatcgctgacacctggcccaag
tactgttgcttcctggcctgcatgctcaccttccagtacttcgtctgcattggcgtcccc
ccggccgcctgcaaagactacccatggaggttcccctcatcctccacagactccaacgtc
atcaagtggctgtatttccctgacttccacaccaagcccaacccaatgttcctgctctat
gacttcatgttgctgctgtgtgcctcgctgcagagacaggtgtttgaggaggagaaggag
gaagccgtgcgcctcctggccggtgacaacatggagatctgcagggacctggactccacc
tccttcagtcaacacaaccccgtcccagacttcatacactgcagatcctacctggacatg
ctgaaagtgatcatgttcagctacctcttctggttcgtgctcaccatcatcttcatcacg
ggcaccacccgcatctccatcttctgtatgggctacctggtggcctgcttctacttcctg
ctctttgggggtgacttgctgctcaagccaatcaaaagcatcctgcactactgggatttc
ctgattgcctacaacgtgtttgtgatcaccatgaagaacatactgtcgatactggcctgt
ggatacataaagtccctggtcaccaatcactgttggctcatacagctgttcagcctggcc
tgcactataaaaggctattctaaacctgagcaacaggccaacaagcattgtgacttgcct
agcgacgaggcaggcatcatctgggacagcatctgttttgccttcctgttgctacagcga
cgcgtattcatgagccactacttcctacacgtggtcgccgacattcgctcctcacagatc
ctcgcctccagaggggctgagctgttccaaagcaccatagtgaaagctgtaaaagccagg
atcgaagtggagaagaggtcgatggacctgctgaagagacaaatggaccgtatcaagagt
cgacagcagaagttcaagagggggaaggagaggattttgagcttggtgcaggagagcgga
gacgcaggccacggacacagcaaggacgaggaggaggaggatgaagataaagaaatgagc
agagagaagaaaatacagcggtggtggaggccgtgggtggatcatgcatccatggtgaga
agtggtaactattacctgtttgagacggacagtgaagaagaggaagaggaggataaaaat
gaggaacagcagcccaagaagtctgcatttcagtttgtttaccacgcctggatgaccaat
tccaagacggccatgaaggagcgcagcaaggagaaacgccgcttctggaaaaaatacact
gaagggagcagcagcaagtcaaggacagaggacctggaggaagcagtgcatgttactatg
gaagaggaggaccaggaggagatgaaagcagatggatcagacaacatgctgaagcgagtc
ttcaacatagtcaagttctcctgggtgttgttcctggcgatgttggacagtttcacagcc
tggatcaactccatgtgtcaggaacacctggacatctccaccgtgctacgcattgagcgc
tgtatgctcacgcacgaggttaacaaggggaacaagccttcccgggagagcatccacgtg
tactaccgcaagcaaatgtgcaaggctgcgtccattgagtcgggcctggagagaaccgag
gaggagacgtgccaggactgcatcccccacaaggctgagagctgtgcctgtctggagagc
caagaatctatggcgtctcatgatagcctgtccagtgcgtacacagagagcacactgctc
tactcctgtcgctccactctggaccacactgacacgggtcctgacaacgtacaggtgccc
aagaccagcgagcgtgcccgtcctaaactctgcaagatggaggggctggacctaaagtcc
acctcttcagctgacagcagaggcagccaggccagtgagcacaaccagtgtacagccctc
tgttcccaccaggggaccaccgacaccatcgtggagacaggagaggagccagaccaggac
ctccaagacccccactcctcctgcactgagaccccatccacctccacctccatggggctg
tatatggaacatgagggggttcttctctccaggtccaggggtttggactgggacagtagg
gacagcgtcccagaagtcaaacagacagggttggagagaggaccgtgctacgcccaccac
agtgacctccagctctaccaggcagacctccccagtacagacacagacatccccccctca
tacagcagagctacaggcctggacagggagggggcctcgtacagcagagctacaggcttg
gtcagggaggaggctgaacgggcctcatccattagggcccatcataagaagaggttggtt
gtggtgacacctgacgagaagtctgattttctgtcgggcgtcaggagtggcacgtttccc
tcgctcacccacgagctgacagccagcgatctgctacgcaataggatgttctacgacgag
gagttggaggattcagagcgtttctacggcgatcagccggccctgctccagctgctctat
gctctgtacaacatgctggtggcccactcagagatggtgtgtttcctggtcatcatcctc
aaccacatgatctcagcatccgtggccacgctcgtccttcccatcttcatcttcctctgg
gccatgctgtctgtccccaggcccagcaaacgtttctggatgaccgccatcgtctacaca
gaggtcaccattgtgatcaagtacttcttccagtttggtttcttccccttcaaccagaac
attgagctggacaagtccaaaccattccatcctcccaacatcatcggtgtggagaagagg
gagggatacgtgcactatgacctggttcagctgctagctctgttcttccaccgatctatt
ctcaagtgtcacgggctgtgggatgaggacaaccccaggggaggagggagggaaaccccc
aagcagcaccaccacgagagggagaagaggaccagctccaggccagtggagaagcaggct
gcggagggcagcagctccctgctggagtcggtccgcaaccgcataccccgacaattccac
tccatgtccacctccaccccgctgcgccgcaagagctccagctccgcctcccacctttcc
cagcgcactgtgcgctccgcccactccaaaggagatagtgtgagctcacggcctggcctg
cggagagggcacagcttgcggagaggggacagcctgcggagaggggacagtgtgctgagt
gtccagcacaggagcaagaaggagatgatcctggagaaactcagagagcagctcatcaaa
gccaagagcttcactgtcaaaaaaactctggagatctacattcccatctgtcagttcttc
tacaacctgatccacccagagtacagtgcagtgacagacgtctatgtgctgatgttcctg
gccgacacagtggactttatcatcatcgtcttcggcttctgggcatttgggaaacactct
gcggcagctgacatcacttcctccctgtcggaagaccaggttcccgaagccttcctggtg
atggtgctgatccagtttggcaccatgatcatcgaccgagccctctaccttcgaaagacc
gtcatgggaaaagtcatcttccaggtcatcctggtgttcggcatccacttctggatgttc
ttcatcctgcctggagtcacagagagacggttcagtcagaacacagtggcccagctgtgg
tactttgtcaagtgcatctactttggcctgtcggcctatcagatccgttgtggctacccc
acccgcgtcctgggcaacttcctcaccaagagttacaactacctcaatcttttcctcttc
caagggttccgcctgatcccgttcctgacggagctgcgagcggtgatggactgggtgtgg
acggacaccaccctcagcctgtccaactggatctgtgtagaggacatctacgcccatatc
tttgtcctcaagtgctggaggatgtcagagaagaggtacccccagcctcgcgggcagaag
aagaagaaggttgtgaagtatgggatgggaggtttgatcgtcatgcttcttatctgcatt
gtttggttcccgctgctcttcatgtcactggtcaagtcagtggccggggtggtcaacaaa
cctctggacgtgtcagtcaccatcaccctgggaggctttcagcccattttcactatgagt
gcccagcaaaatcaactgaaggacattagcaaagcagattttgcagacttcatgaattca
tacaactacattccgtcagcgatgcagttcctggaggcctacacgtcagcggacgtggct
gtggcggagctggagggcagttccaactccctgtggaccatcagcnnccccagcaggaag
aacctgatggacgttctcagcaaggaggaatacttccctgtcaccatgtcctggaccatc
cagaggaatctcagtcttggagccaaagctgaaattgcgacagataaacatataacatac
cttgatatgacaacgcgacaagagttaatagatctgctgaatgggaccagaaaccaggct
gtggtgatagaacaagtcttcccatgcttcctcagagctcccagtgactccaatgccaaa
cctatagaacaactctataaagacaatagctacaagaacatcctgctagccctggagaga
acccacaacagcagtggagagatccaggagtggtggatcgtagaccagccgtcggcggga
cagatccagatgaggggtgcggcagttgggaagaagagagaggcgggcctccagctgtac
gtgtttagtgacaaagtcagcccgcccagtctgggcttcctggcaggatatgggatcatg
ggtctctacgcctcggtggtgctcgtcatcggaaagtttgtgcgcgagttcttcagcggc
atctcgcactccatcatgttcgaggagctgcccgtcgtggaccgcatcttgaagctgtgt
accgacatcttcctggtcagagagacgggcgagctggaactggaggaagacctatatgcc
aagctcatcttcctgtaccgatcaccagagactatgatcaagtggaccagggaccagaaa
acaaaatga
DBGET
integrated database retrieval system
