Oncorhynchus tshawytscha (Chinook salmon): 112216481
Help
Entry
112216481 CDS
T05605
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112216481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216481
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112216481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Swi6_N
Motif
Other DBs
NCBI-GeneID:
112216481
NCBI-ProteinID:
XP_042154757
LinkDB
All DBs
Position
LG16:15478952..15588455
Genome browser
AA seq
1943 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKSHHSQLRKACEVALEEIKEESEKLSPPPDSKSD
SSTLPPIKSKTSFVEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDSTA
PGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNI
YLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKISWSLASRKRDRQLQEAKLMERE
RPRQHSQVTQEQEPDSPQLQQHVYLPAKGPPREANGPTTPSTPTTPTPPREANGPTTPST
PTPTTPTPTQGATEEEQGEHGMNDSEFSTAENHQTEAAAAQCAAQRDQETAVEEEEPNYE
EKAQEIVQSILQEVVNTIVGGYCLNPAHLCSDAKEPASETKQPTDIIEPAEVITKVTEVT
EVAEDEGALGSDSENVHANGIPGTPISASFTPSLPDDRLSVCSNDTQESGATTGPVPGAK
FSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPVFKTN
EMFINAIKQYLCVALSKNGVSSIPEVFSLSLSIFLTLLSHFKTHLKMQIEVFFKEIFLYI
LETSTSSYDHKWMVIQTLTRICADAQGVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRA
GHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGRAGQEKPSEQETN
ETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNK
KPKRGVQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQMD
FQGKDFVYALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSI
IMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKEIT
LKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAW
TPFLAAFSVGLQDCDDTEVAFLCLEGIRFAIRIACIFTIQLERDAYIQALARFTLLTASS
GITEMKQKNIDTIKTLITVAHTDGNYLGTSWHEIMKCISQLELAQLIGTGVKARYISGTV
RGKEGFITSTKEQSNDEYLGLAGGTVDRKQILSIQESIGETSSQSVVVAVDRIFTGSTRL
DGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHF
NKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDM
VVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHISTNVFEKHFPA
TIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKDYTSDDMNVVPED
RVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRIF
DNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFESLSDVLLDDILAQLYWCVQQDNEQ
LARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHALLTWRPAGAEGDPMTPQ
DISDRQLDSISQKSVDIQSHSEDQHSINSAERVAMETRRQSQYSTGIYEDGPRNRTPIKI
QEQRLFSALLIKCVVQLELIQTIDNMVFFPATSRKEDAENLAAAQRDSLDAADVLVETQD
QGMYHYLTSEQLFKLLDCLLKSHHFAKAFNANNEQRTTLWKAGFKGKSKPNLLKQETSSL
ACGLRILFRMYTDDSRQTAWEEVQRQLLNVCSEAVAYFLTLTSESHREAWTNLLLLFLTK
VLKISDDRFKAHASRYYPLLCEIMQIDLIPELRSVLRKFYLRIGIVFQIAQLPDTSQLEQ
EPMPEPGLEVEVERGEVAGEEAQ
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaaaaagacgaaaaacatgtttttaacaagagctttggagaagatcctg
gccgacaaggaggttaaaaagtctcatcattcacaattgcgcaaagcctgcgaggtggca
cttgaggaaataaaggaagagtctgaaaaattaagtcctcctccagacagcaaatcggat
tccagcactcttccgccaatcaaatcaaagaccagcttcgtcgaggccgacaagtacttc
ctgccgtttgagttggcatgtcagtccaaatgtccccgcatcgtcatcacatcactagac
tgtttacagaagctgatagcgtatggccacctgaccggcagcgctccagacagcacggcc
cctggcaagaagctcatcgacaggatcatcgagaccatctgcggctgcttccagggacca
cagacagatgagggggtgcagctacagatcattaaggccctgttgacggctgtgacctcc
cagcacatagagatccatgagggcacagtgctgcaggcggtcaggacctgctacaacatc
tacctagccagcaagaacctcatcaaccagaccacggccaaggccacgctcactcagatg
ctcaatgtcatcttcgcccgcatggagaaccaggcacttacaaatcacaagatatcttgg
tctctggcctcgagaaaacgtgaccgccagctccaggaggccaagctgatggaaagggag
aggccccgtcagcactcccaagtcacccaggaacaggaaccggactcaccccagctccag
cagcacgtctacctcccagccaagggccctccccgggaggccaacggccccaccaccccc
tctacacccaccactcctacccctccccgggaggccaacggccccaccaccccctctaca
cccacccccaccactcctaccccaacccagggggccacggaggaggagcagggggaacat
gggatgaacgactctgagttcagcacagcagagaaccatcagacagaggcagcagcagca
cagtgtgctgctcagcgtgaccaagagacagcagtggaggaggaggagcctaactatgag
gagaaagcccaggagattgtccagagcatcctacaggaagtcgtcaacaccattgttgga
gggtactgcctgaaccctgctcatctgtgttcagatgccaaggagcctgctagcgagacc
aagcagcccacagatattatcgaacccgctgaggtcatcaccaaggtaacagaggtcaca
gaggtggcggaagacgagggggcgctgggcagtgacagcgagaatgtccatgccaacgga
atccccggcacgcccatctctgccagcttcaccccgtcgctgcccgacgacaggctgtct
gtctgctccaatgatacacaggagtcgggggcgaccacaggcccagtaccaggtgctaag
ttctcccatattctccagaaggatgccttcctagtgtttagatcgctctgcaagctgtct
atgaagcctctgtcagatggaccgccagacccaaagtcccacgagctgcgctccaaggtg
ctgtccctccagctgctgctgtccatcctgcagaacgctgggcccgtcttcaagaccaac
gagatgttcatcaacgccatcaagcagtacctgtgtgtggcgctgtctaagaacggcgtc
tcctccatcccagaggtcttctcgctctcgctctccatcttcctcaccctcctctctcac
ttcaagacccacctcaagatgcagattgaggtgttcttcaaggagattttcctgtacatt
ctggagacgtccacaagctcctacgaccataaatggatggtcatacagaccctcaccaga
atatgtgcagatgcccagggtgtggtggatatctatgtgaattatgattgtgacttgaat
gctgctaatatctttgagaggctggtgaatgacctctcgaagatcgcacagggccgggca
ggccacgagctcggcacaacaccactccaagagttgaccctgaggaagaaaggcctggag
tgtctggtgtccatcttgaagtgtatggtagagtggagtaaagaccagtatgtcaacccc
aactcccagaccagccttggaagagcaggtcaggagaagccctcggagcaggagaccaat
gagacgaaggccccagagaccatcaaccgctacggaagcatcaactccctggactccaca
gcctcgtcgggcatcgggagctacagtacacagatgtcagggacagacaacccagagcag
tttgaggttctcaaacaacagaaggagatcatcgagcagggcatcgacctgttcaacaag
aaaccaaagaggggtgtccagtacctccaggagcaaggtatgctgggaaccaccccggag
gacctcgctcagttcctgcaccaggaggagaggctggactcgactcaggtgggcgagttc
ctgggggacaatgatcgcttcaataaagaggtcatgtatgcctacgtggaccagatggac
ttccaaggcaaggactttgtctacgctctcagaacgttcctcgagggcttccgtctcccg
ggagaggctcagaagattgacaggctcatggagaaattcgctgcgagatacttagaatgc
aaccaggggcaaactgagtttgcgagtgcagacactgcgtacgtccttgcctactcaatc
attatgttgacaacagaccttcatagtccgcaggtgaagaacaagatgactaaagagcaa
tacatcaagatgaacagagggatcaacgacagcaaggatctaccggaggagtatctgtct
gccatctacgacgagatcgcagggaagaagatcgctatgaaggagaccaaggaaattact
ctgaaatccaacaagcacagtgtggccagtgagaagcagaggcggctgctgtataatgta
gagatggagcagatggctaagacagccaaggccctgatggaggctgtcagtcacgtccag
gctcccttcaccagcgccacacacctggagcatgtcagacccatgttcaagctggcctgg
accccgttcctagcagccttcagtgtgggcctccaggactgtgacgacactgaggtggct
tttctctgtctggagggaatacgctttgccatccggatagcctgcatcttcaccatacag
ctggagcgggatgcgtacatccaggccctggcacggtttaccctgctcacagccagctct
ggcatcactgagatgaagcagaagaacatcgacaccatcaagactctcatcaccgtcgcc
cacacagacggaaactacctgggcacctcctggcacgagataatgaagtgtatcagtcag
ttggagctggcccagctgatcgggacgggggttaaggccaggtacatctcagggacggtt
cgggggaaagagggcttcatcaccagcaccaaggagcagagtaacgacgaatacctgggc
ctggcaggtgggacagtagaccggaagcagatcctcagtatccaggagtccataggagag
accagctcccagagtgtggtggtggctgtagacagaatattcacaggttctaccagactg
gatggtaatgcaattgtggactttgtgcgctggttgtgtgctgtgtctatggatgagctg
gcctcgccgacacacccccgcatgttcagcctgcagaagatagtggagatctcctactac
aacatgggacgtatcagactgcagtggtccaggatctgggaggtcattggagaccacttc
aacaaggttggatgtaaccccaacgaggacgtggctatctttgctgtggattctctccgg
cagctgtccatgaagtttctagagaagggagagctggcaaacttcagattccagaaggac
tttctgaggcctttcgagcacatcatgaaaaagaacagatctccaacgatcagggacatg
gtggtgcgctgcatagcccagatggtcaactcacaggcggggaacatccggtcgggctgg
aagaacatcttctcagtgttccacctggctgcctcggaccaggacgagagcatcgtagag
ctggcattccagaccacggggcacatctccacgaatgtatttgagaagcacttcccagcc
accatagactccttccaggatgcagtcaagtgtctgtctgagtttgcctgcaacgcctcc
ttcccggacaccagcatggaggccatccgcctcatccgacactgcgccaaatacgtctct
gacaggccccaggcgttcaaagactacaccagtgatgatatgaatgtagtcccagaggac
cgggtgtgggtgagagggtggttccccatcctctttgagctgtcctgcatcatcaacagg
tgtaaactggacgtcaggaccaggggtctgacggtgatgtttgaggtgatgaagacctat
ggacacacctttgagaaacattggtggcaggatctgttcaggatcgtcttcaggatcttt
gacaacatgaagctgcctgagcagcaaactgagaaagcagagtggatgacgacgacctgt
aaccacgcactttacgccatctctgacgtgttcacgcagtactttgagtctctcagtgat
gtcctgctggatgacattctggcacagctgtactggtgtgttcagcaagataatgagcag
ttggcccggtcaggcaccaactgtctggagaacgtggtcatcctgaatggagagaagttt
actccggagacctgggacaagacctgtaactgcatgctggacatcttcaagaccaccatc
ccacacgcgctgttgacatggagaccagcaggagcagagggagatcccatgacaccacag
gacatatcagacagacagctggactcaatttcccagaagtccgtggacatccagtcccat
tccgaggaccagcattccatcaacagcgcagagagggttgccatggagacccggcggcag
agtcagtacagcacaggcatttatgaggacggccccagaaacaggaccccaataaagatc
caggagcagcggttattctcagccttgctcattaagtgtgtggtgcagttggagctgatc
cagaccatagacaacatggtcttcttccctgcgaccagcaggaaggaggatgctgagaac
ctggctgctgcacagagagattctctggacgcagcagacgtacttgtggagacccaggac
cagggaatgtaccactacctgacctcagaacagctgttcaagctgctggactgtctgctg
aagtcccaccacttcgccaaagccttcaacgccaacaacgagcagaggaccactctctgg
aaggcaggttttaaagggaagtcaaagcccaatctgctgaagcaggagaccagcagtctg
gcgtgtggcctgaggatcctgttccggatgtacactgacgacagccgtcagactgcctgg
gaagaggtccagagacagctgctcaatgtgtgcagtgaggcagtagcctacttcctgact
ctaacatcagagagccacagagaagcctggacaaacctgctcctcctcttcctcaccaag
gtcctgaagatcagtgatgacaggttcaaggcccatgcgtccaggtactaccctctgctg
tgtgagatcatgcagattgatcttatcccagaattgcggtccgtgctgcggaagttctac
ctacgcatcgggatcgtgttccagatcgcccagctacctgacacctcccagctggaacaa
gaaccaatgccagaaccaggactggaagttgaggtggagagaggggaggtggctggagag
gaagcccagtga
DBGET
integrated database retrieval system
