Oncorhynchus tshawytscha (Chinook salmon): 112216510
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Entry
112216510 CDS
T05605
Symbol
relch
Name
(RefSeq) RAB11-binding protein RELCH homolog isoform X1
KO
K26154
RAB11-binding protein RELCH
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216510 (relch)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112216510 (relch)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
tRNA-synt_1_2
LisH
SurA_N_2
Troponin
SlyX
Motif
Other DBs
NCBI-GeneID:
112216510
NCBI-ProteinID:
XP_042154859
LinkDB
All DBs
Position
LG16:complement(18879762..18916396)
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AA seq
1185 aa
AA seq
DB search
MAAGNVNPFNLSDSEDEADQRAEDGVHIEKSPSVGTQGPSSNNPFSPQADAEPPALLVSS
TRTSPSVEGISVSVAAAAMTVALAETRVSVDVIAAQLIRDHYILTALEFHTELLESGREL
PRLRDYFSNPGNFERQTGTPPACKEQGLGPGGPLNRAGSISTLDSLDFARYSDDGNRESD
ERVAVLEFELRKAKETIQALRTNLTQAAESDTQERNKNYSSHPETQEPIRPLEKRALNFL
VNEYLLKNEYKLSAITFSDENDDQDFELWDDVGLNIPKPPDLLQIYRNCGSALPSPRNTV
DVAVGVESGELTGNYITQKSDLLQQQQTEVVEELEYQISLLNEEKQSLADYIKKLQSEIQ
SLRRTVSPPPHDQGSQPNPPSSSNPPQPLLDNGQYLDIRGASEPDKPPLRAPPTQTISNP
THTSSQPHAKLKSRGTVVFDQPNRKLSPAFQQALLSFCKMSADSRLGAEVSRIADNEESV
MLMLGRCLPHIVPNVLLAKRERMVAHLCQELIPLILCTACLHPEPKERDQLLHILFNLIK
RPDDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAEACGALAPYL
PKEIRSSLVLSMLQQMLAEDKADMVREAVVKSLAIIMGYIDDPDKYSQGFELMLLSLGDP
SERVVSAIHQVFIPAFAAWTTELGNLQTTLIPSLLARIEKLLKQGEHGLDEHKLHMFLSA
LQSLIPPLFSVVIQNAPFTHRVNLQGDIPPIEVTRFPRPASPLQDIATIVGSRETLSALL
ILYDYQLEHEGTTGWDSLLWVVNQLLPQLIDIVGRINVASTTCVHEFSRFFWRLCRTFGK
IFTNTKVKPQFQEILRLSEENVDALTGNGILTKATVPIYATGVLTCYNQDEDRKLLVGFL
EDVMTTLSLSHAPLDSLKASFVELGANPVYHELLLTVLWYGVVHTSALVRCTAARMFELL
VKGVNETLVAQRVVPALITLSSDPEISVRISTIPAFGTIMETVTQKELLERVKMQLASFL
EDPQYQDQHSLHMEIIRTFGRVGPNAEPRFRDEFVLPHLHKLALGNNVQATESKRIDIAT
QLFEAYSALSCCFISEELMVNHFLPGLRCLRTDMEQLSPEHEVILSSMIKEGEMKVENRG
IGQAEGSVSIAASLVGEDAKTKFLSKMGQLTTSGAMLANVFQRKK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtaacgtcaacccgtttaatctgagtgattctgaagatgaggcagaccag
agagcagaggacggtgttcacatcgaaaagagccctagcgttggaacgcaaggcccctcg
tccaacaacccattctctccgcaagcggacgccgagcccccggcccttttagtgtccagc
acccggaccagccccagtgtggaaggcatctcggtatcggtcgcagctgcggctatgaca
gttgccttggcagagacccgggtctcggtagatgtgatcgctgctcagttaatacgggat
cattacatcctcacggcccttgagtttcataccgaactgttggaatcagggagggagctt
ccgcggttgcgtgattatttctccaacccgggcaacttcgagaggcaaaccggcactccg
cccgcttgtaaagaacaaggactgggaccagggggaccgctaaaccgagcgggcagcatc
agcacattggactctctagacttcgctcgttactctgacgacgggaaccgggagtcggac
gagagggtggcagtgctggagtttgagctacggaaagccaaggagaccattcaggctcta
cgcaccaacttgactcaggcagcagaaagcgacactcaggagagaaacaagaactacagt
tcacatcctgagactcaggaacctatccgcccactagagaagcgagccttaaatttcctt
gtgaatgaatatttattaaagaatgaatacaaactgtcggccatcaccttctctgatgaa
aatgatgaccaggactttgagttgtgggacgacgtgggcttgaacattccaaagcctccc
gacctattacagatctacaggaactgtggctccgcccttccgtcgccgcggaataccgtg
gacgtagccgtgggagtggagtcaggcgagctcactgggaactacattacccagaaatct
gatctcttacagcagcagcagacggaggtagttgaggagttggagtatcagattagtcta
ctgaatgaggagaaacagagtctggccgactatatcaagaaactacagagtgagatccaa
agcctgagaaggacagtgtccccccctcctcatgaccagggctcacagccaaaccccccc
tcctcctccaaccctccccagccccttctggacaacggtcagtacctggatatcaggggc
gcctcagaacctgataaacccccactgagagcaccccccactcagaccatcagtaaccct
acacacacctcttcacaaccccatgccaagctaaagagcagagggacggtggtgtttgac
cagcccaacaggaagttatcccctgcattccagcaggccctgctgtccttctgtaagatg
tcagctgacagtcgtctgggtgcagaggtgtcgaggatagcagacaatgaggagagtgtg
atgctgatgttgggtcgctgtctccctcacatcgtccccaatgtcctcctggccaaacga
gagagaatggttgcacacctgtgccaggagttgattcctctcatcctatgtacagcgtgt
ctccacccggagcctaaagagagagaccagctcctccacatcctcttcaacctcatcaag
agacctgacgacgaacagaggcagatgatcctaacaggttgtgtggcgtttgccagacat
gttggtcctaccagagttgaggctgaactcttaccacaatgctgggaacagatcaaccat
aagtatccagagaggaggttgttggtagcagaagcctgtggagccttagcaccttacctg
cctaaggagatccgtagttccctggtgttgtccatgctgcaacagatgctggctgaagac
aaagcagacatggtcagagaggctgtggtcaaaagcctcgctatcatcatgggatacatt
gacgaccctgacaagtactcccagggtttcgagctgatgttgctgtcccttggtgaccca
tctgagagggtggtcagtgctatccaccaggtgttcatcccagcattcgctgcctggacc
acagagctgggaaacctccagaccactctcatcccctctctactggcccgcattgagaaa
ctactgaagcagggagaacatggtcttgatgaacacaagctccacatgttcctgtctgcc
ctccagtctctcatccctcctctgttctctgtggtgatccagaacgctcccttcacacac
agagttaacctgcaaggagacattccccccatagaggtgacgcggttccctcgtccggcg
tctcctctgcaggatatagcgactatcgttggcagccgggagacgctgagcgcccttctc
atcctgtatgattaccagctagaacatgagggcaccacaggctgggacagcctgctatgg
gtggtcaaccaacttcttccccagctgatagacatagtaggtcgtattaacgtagcctcc
actacgtgtgtccatgagttctcacgtttcttctggagactctgtcgcacatttggcaag
atcttcacaaacacgaaggtaaaaccacagttccaagagatcctacggctctctgaagag
aatgtggatgctttaactgggaatggtattctgaccaaggctactgtccccatttatgct
acaggggtactgacatgctacaatcaggatgaggatcgtaagctgcttgttggttttcta
gaggacgtcatgacgacactgtctctctcacatgcccccctggacagcctcaaagcctcc
tttgtagagctgggggctaacccagtgtaccatgagttgttactgacagtgctatggtac
ggagtggtccatacctccgctctagttcgctgtaccgccgcacgcatgtttgagctgctg
gtgaagggggtgaatgagacgctggtggctcagagggtggtgcctgctctcatcacgctc
tccagcgaccctgagatttcagttaggatctctactatccctgcctttggtaccatcatg
gagacggtcacgcaaaaagagctgttggagcgtgtgaagatgcagctggcatcgttcctg
gaagacccacagtaccaggaccaacactctctacacatggagatcatcaggacctttggc
cgggtcggacccaacgctgagccacgcttcagagacgagtttgtgctgcctcacctccac
aaactagcgttgggtaacaacgtccaggctacagagagtaagaggatagacattgctact
cagctgtttgaggcctacagcgctctctcctgttgcttcatctcagaggagctgatggtg
aatcacttcctgcctggcctgaggtgtctgaggaccgacatggaacagctatctcctgaa
cacgaggtgatcctgagctccatgatcaaggagggggagatgaaggtagaaaacagaggg
atcggacaggcagagggctctgtgtccattgctgctagtctggttggtgaagacgctaaa
accaagttcctgagtaagatgggtcagctaaccacgtccggcgccatgctggccaacgtc
ttccagaggaagaaatga
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integrated database retrieval system
