Oncorhynchus tshawytscha (Chinook salmon): 112216594
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Entry
112216594 CDS
T05605
Symbol
her9
Name
(RefSeq) transcription factor HES-4-B isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112216594 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112216594 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112216594 (her9)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112216594 (her9)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112216594 (her9)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
112216594 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Caulimovir_coat_dom
Motif
Other DBs
NCBI-GeneID:
112216594
NCBI-ProteinID:
XP_024232347
UniProt:
A0A8C8EHD3
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All DBs
Position
LG16:complement(56963054..56964890)
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AA seq
290 aa
AA seq
DB search
MPADTMEKQTASPIAGAPANASHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADNTVLSKYRAGFNECMNE
VTRFLSTSEGVNTEVKSRLLNHLSGSLGQMIAMNYSQPTPTQQAHLAQPLHVQLPSTVPS
SVSMGSKLSTVEALSPKVFGGFQLVPATDGQFAFLIPNPAFASASTPVIPLYANAGVPMS
VNASPVHCSSAPTASSPVHGMTSFVGVSQAVSPVGVSTGSESTEAVWRPW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgacaccatggagaaacaaacggcatcccctattgctggtgcacctgcaaat
gcttcccatactccagacaaacccaagaatgccagtgagcatagaaagtcctcaaagcca
atcatggagaaacgtaggagagcgaggataaacgaaagccttggccaactcaagacactc
atcctcgatgcacttaaaaaagatagttccagacattctaaattggagaaagccgatatt
ctggaaatgacagtgaagcacttacggaatttacagcgtgtgcagatgactgcagcgttg
tcagcagacaatactgtcctcagtaaataccgggcgggattcaacgaatgcatgaacgag
gtcactcgcttcttgtccaccagcgagggggtgaacacggaggtgaagtcgcggcttctc
aaccacctgtcaggttccctaggccagatgatcgccatgaactactcacagccaacccca
actcaacaggctcaccttgcgcagcctcttcacgtgcagctaccttctaccgtgcccagc
agtgtctctatgggttccaaactcagcaccgtggaagccttgtctccaaaagttttcggg
gggttccagcttgtgcctgccaccgatggacagtttgcttttcttattcccaaccctgca
ttcgcctcagcatcaaccccagtcatccctctgtatgctaacgcaggtgtacctatgtcg
gttaacgccagtcctgtccactgcagctctgcgccaacagcatcatccccagtccatggg
atgacatcattcgtcggtgtttctcaggccgtcagccctgtcggtgtcagcactggttcg
gagagcactgaggctgtttggcgaccctggtag
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