Oncorhynchus tshawytscha (Chinook salmon): 112216680
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Entry
112216680 CDS
T05605
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial isoform X1
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112216680
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112216680
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
112216680
Peptidases and inhibitors [BR:
otw01002
]
Serine peptidases
Family S54: Rhomboid family
112216680
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
112216680
Mitophagy factors
Parkin-dependent mechanism factors
112216680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Caps_synth_CapC
Motif
Other DBs
NCBI-GeneID:
112216680
NCBI-ProteinID:
XP_024232425
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All DBs
Position
LG17:complement(457340..464789)
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AA seq
207 aa
AA seq
DB search
MLWFFAVGVPYLQRSMIRYFTSNPASKTLCFPMLLFTFSHYSFFHMVANMYVLWSFSSSI
VSMLGREQFMAVYMSAGVISTMFSYVCKTASGCLGPSLGASGAIMTVLTAVCTKMPEAKL
AIIFLPIYAFSAGNALKAIVVMDTAGLVLGWRYFDHAAHLGGALFGVWYIMYGHELIWKN
REPLVKVWHDLRTKGPSGGGNGGNGPQ
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggttttttgctgttggagtgccatacctccagcgctctatgatcagatacttc
acatccaaccctgcctccaaaaccctgtgtttccccatgctcctgttcacgttcagccac
tactccttcttccacatggtggccaacatgtacgtcctctggagcttctcctccagcatc
gtctccatgctaggcagggagcagttcatggccgtttacatgtctgcaggtgttatctct
acgatgttcagctatgtatgcaagacagccagcgggtgcttaggtccctctcttggtgcg
tcaggagccatcatgacagtcttgactgccgtctgtaccaaaatgccagaggctaagctg
gcaatcatcttcctccccatttatgctttctctgcaggcaatgcattgaaagccatagta
gtcatggacacagctggcctagttttaggatggcgatacttcgaccacgcggcccatcta
ggcggagctctttttggcgtctggtacatcatgtatggccacgagctgatatggaagaac
cgtgagccactagtgaaggtgtggcacgaccttaggacaaagggtcctagtgggggagga
aacggtggcaacggcccccagtag
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