Oncorhynchus tshawytscha (Chinook salmon): 112216722
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Entry
112216722 CDS
T05605
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112216722
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112216722
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Ortholog
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GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
112216722
NCBI-ProteinID:
XP_024232509
UniProt:
A0A8C8FXD3
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Position
LG17:complement(3893796..3899009)
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AA seq
773 aa
AA seq
DB search
MRRHSLFSRPPRPAGHRHCDSCYSRRCKAPVEISVSCVLIPCRLLCGALFHMCKEEEHAL
LCPNEKVPCLNAAFGCPIIMPRSWQAGHLQVCPASVVCCSMEWIRWPADEAYANTHPDIH
AHTHTLHENLLKEQKAGEQLDLAMALDDQRHLYARMKMKTLYPEMIVKVEGEEEEKKEDK
KKEKTEDWATVRLCNGASTLCTAADDGWSEDRPYHILSGVPETAVTDLSDFSLEKEEGDV
GVEEPGGDISSDRYNRYERMFNMDKGGCKVDTKNSLGREGKEWNHWMELEQQSCREKKER
RDAEELMGALQAPGAPEGPRGTEANRNATGITGMAPWQDGVLQRMAKEVTPQEFNMYLVH
HGRMLLTFGQMDACTPREKDFVYGNIEPIPVQTLYSFKVPVSYREKQRSVHYYDASARAE
STWACVDTSDLGALQESWWTDEAESTLLGYAEREVMGHQISEERGQDGLYVDMGMQTHSF
KTAPFRRDTTLADLTRDRPLKLRLQLHADSTSSRHNKASSAFTFLCGHSFQRREFPKHFR
NVHTDIQTCASGWFEQRCPLAYLGCTYSQRRLEPFKQPATVTYNQELSIFNLRPTVPASQ
WEGPEPLKSSKSQSAPEPVRTPRKRRSRGEGDCDSLSALPSEVLCHMASFLDSLSLSQLA
LVSRLMREVCSSLLQDRGMVSLLWEKKTYKSGVAKWKAKTVWEFSHLFSTVDLWRFIDNV
PSMSEHLKVCPYYQTWVPPQPVALPSMSHLQGGTQEQDNQQRQSLVAQFMGNR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtcattcccttttctctcgtcccccccgtcctgccggtcatcgccactgtgac
agctgctacagccggcggtgtaaggcccccgtggagatctccgtgtcttgtgtgctcatc
ccctgccgccttttgtgtggagccctgttccacatgtgcaaagaggaggagcatgcgctc
ctctgccccaatgagaaggtgccatgcctcaacgccgccttcggctgtccaatcatcatg
ccccgttcctggcaggcgggccacctgcaggtctgtcccgccagtgtggtgtgctgctca
atggagtggatccgctggccagccgatgaagcctacgcaaacacacaccccgacatccac
gcacacacacacaccctgcatgagaacctgctgaaggagcagaaggcaggagaacagttg
gacctggccatggccctggatgatcagagacacctgtacgcccgtatgaagatgaagact
ctctacccagagatgatagtgaaggtggagggagaggaagaggagaagaaagaagataag
aaaaaggagaagacagaagactgggccacagtgcgtctatgtaatggggcttctaccctc
tgtacggctgctgatgatgggtggagtgaagataggccatatcatatcctatctggcgtt
ccagaaacagccgtgacagacctttcagacttttctttggagaaggaggagggagatgtg
ggtgtggaggaacctgggggagacatcagctctgacagatacaacaggtatgagaggatg
ttcaatatggataaaggaggctgtaaagtggacaccaaaaacagcctgggcagagaaggg
aaggagtggaaccattggatggagttggagcagcagtcgtgcagagagaagaaggagaga
agagatgcagaagagttgatgggcgctctgcaagctccaggagctccagagggaccaagg
gggaccgaggccaaccgtaatgccacagggattacaggtatggccccgtggcaggacggg
gtcctgcagcgcatggccaaggaggtcaccccccaggaattcaacatgtacctggtgcac
cacggacgcatgctgctcacctttggccagatggatgcctgcacgccacgggaaaaagac
tttgtctacggaaacatagagcccatccctgttcagacactgtactccttcaaggttcct
gtcagctaccgtgagaagcagcgtagtgtccactactatgacgcatcagcccgtgctgag
agtacctgggcctgtgtggatacgtctgacctgggggcattacaggagtcctggtggacg
gacgaggctgagagcacactactgggatatgcagagagagaggtcatggggcatcagatc
agtgaggagcgtggacaggatgggctttatgtggacatggggatgcagacccactccttc
aagacggcaccgttcagaagagacacgacgttagcagacctgacaagggacaggcctctg
aagctccgcctccagctgcatgcggacagcacctccagccgacacaacaaggctagctct
gccttcaccttcctctgtggacactccttccaacgaagggaattccccaaacacttcagg
aacgtgcacacagacattcagacgtgtgctagtggctggtttgagcagaggtgtcccctg
gcctacctgggctgcacctacagccagagaaggttagagcctttcaaacaacctgccacg
gtcacctacaaccaggaactgagcatcttcaacctccgacccaccgtcccagcttctcaa
tgggagggaccagagccccttaaatcctccaagtcgcagtctgctccagaacctgtcaga
acccccaggaagaggcggtcgaggggagaaggggactgcgattctctgagtgctttgcca
tccgaggtgctgtgccacatggccagcttcctggacagcctgtccctgtcccaactggcc
cttgtgtcccgcctcatgagagaggtatgttcctctctgctgcaggacagggggatggtg
tccctcctctgggaaaagaagacctacaagtctggtgtggccaaatggaaggccaaaacg
gtgtgggagttcagtcatctgttctctacagtagatttgtggcgttttatagacaacgtg
ccgtccatgtcggagcacctgaaggtttgtccctactaccagacctgggtaccaccccag
ccggtggccctgcccagcatgagtcacctacagggtggaacacaggagcaggacaaccag
cagagacagagcctggttgctcagttcatgggcaacagatag
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