Oncorhynchus tshawytscha (Chinook salmon): 112216732
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Entry
112216732 CDS
T05605
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112216732
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112216732
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112216732
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
112216732
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112216732
NCBI-ProteinID:
XP_024232538
UniProt:
A0AAZ3RN36
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Position
LG02:36908042..36977035
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AA seq
493 aa
AA seq
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MATNRERQVGHMTGFSPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHKDTFPSLVQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHLFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
SSDSGDSASAAAPPAIQAIKKEREEEKSLEEEDEEDEWGDEDRERGADSDGEPWGEAAVA
AGGSQKGATGRAQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggaacggcaggtgggtcacatgactggcttttcacctgctgtctac
ccctttgccttcaactccatgaggagccactcccccttcgacctgctggccaatagcagc
ctgtttggacgatttggggcagacctaccgaaggagatggctgcattgtcagtagagacc
cagagcaccagctctgaggagatggtgcccagttcaccttctccgccccctcctccccgc
atctacaagccttgcttcgtgtgccaggacaagtcctctggataccactatggggtcagc
tcatgtgagggctgcaagggattcttccggcgcagtattcagaagaacatggtgtatacc
tgccaccgcgacaagaactgtcagatcaacaaggtgacccgtaaccgctgtcagtactgc
cggctgcagaagtgctttgaggtcggcatgtccaaagaagcagtgcgtaatgacaggaac
aagaagaagaaagatgtgaaggaggaggtggtgttgccggagagctatgagctcagtgga
gaactggaggagctagtcaacaaagtcagcaaggcccacaaagacaccttcccctcactc
gtccagctgggcaaatacactacaaactccagtgcagaccaccgtgtgcagttggatctg
gggctgtgggataagttcagtgaactttccaccaagtgcatcatcaagatagtggagttt
gccaagcgcctgccaggcttcaccaccctcaccatcgctgaccagatcacacttctcaaa
tcagcctgtctggacatactgatgctgaggatctgcactcgctacactccggagcaggac
acaatgaccttctcagacgggctgaccctgaaccggacccagatgcacaacgcaggcttc
ggcccgctcacagaactggtgtttgcctttgctggccagctgctgcctctggagatggat
gacacagagactggcctcctcagcgccatctgcctcatctgtggagaccgtatggacttg
gaggagccccagaaggtagacaagctgcaggagcccctcctggaggccctaaagatctac
gcccgccgcagacgccccaacaagccacatttgttcccccgtatgctgatgaaggtcact
gatctcaggggcatcagcaccaagggtgcggagagggccatcactctgaagatggagatc
ccaggccccatgcctcctctgatcagggagatgctggagaaccctgaagcctttgaggac
agcagcgactctggggacagcgcctctgctgccgccccccctgccatccaggccatcaag
aaagagagagaggaggagaagagcctggaggaggaagatgaggaggacgaatggggggat
gaggatagggagagaggggcggacagcgatggggagccttggggggaggctgcagtggca
gcaggggggtcccagaaaggggcgactgggagagcccagtga
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