Oncorhynchus tshawytscha (Chinook salmon): 112216761
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Entry
112216761 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112216761
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112216761
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216761
04121 Ubiquitin system [BR:
otw04121
]
112216761
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112216761
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112216761
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112216761
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112216761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
DUF5748
Motif
Other DBs
NCBI-GeneID:
112216761
NCBI-ProteinID:
XP_024232583
LinkDB
All DBs
Position
LG17:6131842..6172469
Genome browser
AA seq
1017 aa
AA seq
DB search
MAEGGAADLDTQRGEVAALLKTQLRKGDTWYLVDSHWFKQWKKYVGFDSWDKYQMGDQNV
YPGPVDNSGLLTSDGDVLAIKEHLIDELDYILIPTEGWNKLVSWYPLMEGQEPISRKVVE
QGMFVKHCKVEVYLTELKLCEDRNMDNVVTRRFSKADTIDTIEKEMRKLFSIPDEKETRL
WNKYMSNTFEPLNKPDSTIQDAGLYQGQISMQVLVIEQKNEDGSWPRGSSAPKSSGTSNL
SALPKISPSSLTNNHNSSFNSRNVKNSSYSLPSYHPYNSYECSEGRQSERAGLCGLSNLG
NTCFMNSALQCLSNVPPLTEYFLKDKYNDELNEDNPLGMKGEIAKAYAEITKQSWSGKYS
YVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYILLKDAEGRPD
KVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCAKVSVTFDPFCYLTLPLPMKKERT
LEVYLVRLDPLARPTQYKLTVPKVGYISDLCTSLSTLSGVPAEKMIVTDIYNHRFHRIFA
TNENLSSIMERDDIYVFEVAVNRQEDTDHVVIPVHLREKYKQSGYNHTSTPLFGQPFLIT
VPRTLSEDKLYNMLLLHLCRFLRSVVEEEDTEETTPSSKQHIVNGNATNGVLEEGSPSEM
ETDEQDGDDESSQDQELPSENDNSQSEDSVGGGDNELENGVGPGGENSGTKGHQNQTSMT
MGEKKRLFTFQFNNMGKTDFSLIKEEPRHIRFDEGHLRLSDQSYLSLDWEPEVKKKHFDE
GITEDFEKHESMEYKPQKKAFFKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDL
WSLPPVLVVHLKRFSYSRYMRDKLDSLVDFPLSDMEMSEFLIDPNAGPCRYDLIAVSNHY
GGMGGGHYTAYAKNKDDDKWYNFDDSSVSPANEDQIVSKAAYVLFYQRQDTVKGTGYFNL
DREEEEEEEEREEDGEEVEENREGKEERKSVTSSQGASASVQSDEEDVNDNVTMKTK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaggagcggctgatctggatacccagagaggagaagtcgcagcactgctg
aaaacacagctacgaaagggagatacttggtacctagtggacagccactggttcaaacag
tggaagaaatatgtgggctttgacagctgggacaaatatcagatgggagaccagaatgtc
taccctggaccagtggacaactcggggctccttacaagtgatggggatgttctggccatc
aaggagcacctcattgatgagctggactacatcttgatcccaactgaaggctggaataag
ctagtgagctggtatccactgatggagggacaagagcctatctcacgcaaggtggtagaa
cagggtatgtttgtgaagcactgcaaggtggaggtgtacctcacagaactgaagctgtgt
gaagaccgcaacatggacaacgtggtcaccagacgcttcagcaaagcggacacgatagac
accattgagaaggagatgcgtaaactgttcagtatcccagacgagaaagagaccaggttg
tggaacaagtacatgagcaacacttttgagcctctgaacaaaccggacagcactatacag
gacgcaggactctaccaaggacagatatccatgcaggtcctggtaatagagcagaagaat
gaggatggatcgtggcctagaggttcctctgcacctaagtcatctggtacttccaatctt
tctgctttgccaaagatctccccttcatctctcacaaacaatcataacagcagcttcaac
agcaggaatgtgaaaaactccagctacagccttccgtcctaccacccttataacagctat
gagtgctccgagggcaggcagagtgagcgggctggcctgtgtggtctttccaacctggga
aacacctgcttcatgaactctgcactgcagtgtttaagtaatgtacctcctctcaccgag
tatttcctgaaagacaagtacaacgatgagttgaacgaggacaaccctctgggaatgaaa
ggggagatcgccaaggcctacgctgagatcaccaagcagtcgtggtctgggaagtacagc
tacgtcacaccacggcctttcaagacccaggtgggtcgcttcgccccccagttctcaggc
taccagcagcaggactctcacgagctgctggccttcctgttggatggtctacacgaggac
ctgaaccgcatcaggaagaaaccctacatcctgctcaaagatgctgagggcaggcctgac
aaggtggtggccgaggaggcgtgggaaaaccacatcaagaggaacgactccatcatcgtg
gacatcttccacggcctcttcaagtccaccctggtgtgccccgtctgcgccaaggtctcc
gtcacctttgaccccttctgctacctgacactgccgctgcccatgaaaaaggagcgcact
ctggaggtctacctggtcaggctggaccccctggccagacccacacagtataaactgact
gtgcccaaggtgggctacatatcagacctctgtacttcgctctccactctatctggtgtc
cctgctgagaagatgattgtaacagatatctacaaccaccggttccatcgtatctttgcc
accaatgagaacctcagcagcatcatggagagggatgacatttatgtctttgaagtggca
gtgaaccggcaggaggacacagaccatgtggtgatcccagtccaccttagagaaaagtac
aagcagtcagggtacaaccacacctccactcctctgtttggccagcccttcctcatcact
gtccccagaacactcagcgaggacaagctctacaacatgctgctgctacacctctgtcgg
tttttgcgttctgtcgttgaggaggaggacactgaggagacaaccccttcttcaaaacaa
catattgtcaatggcaatgctaccaatggggtcctggaggagggctctcccagcgagatg
gagactgatgagcaggatggagatgacgaatccagtcaggaccaggagctgccctctgag
aatgacaacagccaatcagaggactctgtgggtggtggggacaacgagctggagaacggg
gttggtccagggggagagaactcggggaccaaaggtcaccagaaccaaacgtctatgacg
atgggggagaagaagagattgtttacattccagtttaacaacatgggcaagactgacttc
agcttaatcaaggaggaaccgcggcacatccggttcgacgagggacacctcagactcagt
gaccagtcctatctctctttggactgggaaccagaggtcaagaaaaaacactttgatgag
ggtatcacggaggactttgagaagcatgagagcatggagtataagcctcagaagaaagcc
ttcttcaaactgaaagactgcatcgagctgttcaccaccaaagagaagctcggagctgag
gacccatggtactgtccaaactgcaaggagcaccagcaggccactaagaagctagacctg
tggtctctgcctccagtcctggtggtccatctgaaacgcttctcctacagcagatatatg
agggacaagctggattcactagtcgacttcccactcagtgacatggaaatgtcagagttc
ctgatcgaccctaatgctggtccctgtcgctacgatctcattgcggtctccaaccactat
ggaggcatgggaggaggacactatactgcttatgcgaagaacaaggatgatgacaagtgg
tacaactttgacgacagcagtgtctctccagccaacgaagatcagatagtgtccaaagca
gcgtacgtgctgttctaccagcgccaggacacagtgaagggaacaggctactttaatctg
gaccgagaggaggaggaggaggaggaggagagagaggaggatggagaggaggtggaggag
aacagagaagggaaggaggagaggaagagcgtcacctcatcccagggagcctctgcttca
gttcagagcgacgaagaggatgtcaacgacaatgtcaccatgaaaaccaaatga
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