Oncorhynchus tshawytscha (Chinook salmon): 112216772
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Entry
112216772 CDS
T05605
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216772 (tbc1d22a)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112216772 (tbc1d22a)
Retrieval pathways
112216772 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112216772
NCBI-ProteinID:
XP_042155985
LinkDB
All DBs
Position
LG17:complement(7565876..7778874)
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AA seq
557 aa
AA seq
DB search
MSTDGNKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPQTTPGGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQEKQRQDDADA
SELEDREEEEHEEDVEEQWEEGEESTPEVSFACEPSPLSDGRRVKSLSEAPIGSPKDTSL
HRQQSLPHRPTIPMVARIADQNTSGTPAMTEREASRLDKFKQVLAGPNTDLEELRKLSWS
GIPRQVRPITWKLLSGYLPANTERRESTLQRKRQEYFGFIEQYYDSRNEEHHQDTYRQIR
IDIPRMSPECLMLQPMVTEIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGYV
QGINDLVTPFFVVYVFEYTKEEVENFDVSSLQEAALRNIEADSFWCMSKLLDGIQDNYTF
AQPGIQRKVKALEELVSRIDETVHVHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLWD
TYQAEPEGFSHFHLYVCAAFLVRWRKEILDQRDFQGLMILLQNLPTMHWGNEEVSVLLAE
AYRLKFAFADAPNHYKR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacggaaacaagaaacaattctggaaaagaaatacagctaaggtccctggc
agcatacaacatgtgtatggtgctcaacatccgcctttcgaccctcttctccatgctaat
ctaatcaaagcgggcaacaagccccagacgacaccgggagggaagccaaagaaagccacc
accttccaggagtttgagagcatcaccagcgatgcctgggacgtgggggacgacgacgac
gagctgctcgccatggccgcacagaacctcaacatcgaggtcgtcatggaaaccgccaac
aaggtgatcgagaaccacagcaagcagcaggagaagcagagacaggatgatgccgacgcg
tcagagctggaggaccgagaggaagaggagcatgaggaagacgtggaagagcagtgggag
gaaggggaggaatcgactcctgaggtgtcgtttgcttgtgagcccagcccgctcagtgat
ggcagacgggtgaagtcactgagtgaggcccccatcggatcacctaaggatacgtcgctc
cacagacagcagtccctgccccaccggcccaccatccccatggtggctcgtatagctgac
cagaacacctccgggaccccagccatgacagagagagaggcatcccgcctggacaagttt
aaacaggtcctggctggacccaacactgaccttgaggaattacgaaagttgagctggtct
ggaattccgcgccaggttcgtccaatcacgtggaagctcctttcgggttaccttcctgcc
aacacagagaggagagagagcacgctacagaggaagagacaggaatacttcggtttcata
gaacagtactacgactcgcgcaacgaggagcaccaccaagacacgtacagacagattcgt
atagacatcccccggatgagtccagagtgtctaatgctgcagcctatggtgaccgagatc
cacattgacataccgagaactaatccccttattcctctctttcaacaagcttctgtccaa
gagatctttgagcgtatcctgttcatctgggcgatccgccacccggccagcggctacgtg
cagggcatcaacgacctcgtcacgcctttcttcgttgtctacgtctttgagtacaccaag
gaggaggtggagaactttgacgtgtccagcttgcaggaggcggctttgcgaaacatcgag
gctgacagtttctggtgcatgagcaaattgttggacggcattcaggacaactacacattt
gcccagccggggatccaaaggaaagtcaaggctctggaggagttggtcagcaggattgat
gaaacggtgcacgtccacatgcagcagtatgaagtggagtatctccagtttgcctttcgt
tggatgaacaacctgctgatgagagagctgccgttacgctgcacgatacgcctctgggac
acctaccaggctgaacctgagggattctctcacttccatctctacgtgtgtgctgctttc
ctggtacgatggaggaaagagattctggaccagagagatttccagggtctgatgattctt
ctgcagaacctacccaccatgcactggggcaacgaggaggtcagcgtgctcctggctgag
gcctataggctgaagtttgccttcgctgacgcccccaaccactacaagagatga
DBGET
integrated database retrieval system
