Oncorhynchus tshawytscha (Chinook salmon): 112216774
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Entry
112216774 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112216774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112216774
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112216774
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112216774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
RNase_E_G_Thio
zf-RING_11
Baculo_IE-1
zf-RING_10
DZR_2
Motif
Other DBs
NCBI-GeneID:
112216774
NCBI-ProteinID:
XP_024232605
UniProt:
A0A8C8C6X1
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All DBs
Position
LG02:36516669..36532076
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AA seq
918 aa
AA seq
DB search
MSDVEDMETSPTEMNRNHEVSGPEQQRPHDLSQIQIHVPTGTSSGPVTVIQSQPQRSSVS
QSAFTYKAEISEDVSEEDSSARETADRFSETFGGGTPSATCVNIPSSDDDPDLYQADNDF
KPHSSSSKEMSVDYPAEGDNGSARNKQSQRDQHSPINPQSTQDVDLNQAKDEREEKQTTL
DEATVYVIVEWPWKAILSWKSILQKSLQSWLNNNFKETDCTVERLNGNVAEVKIHPPSVV
EDLLKLKETQLTFKDKAKTSATVRFHGAIPPSFKPWNQSNSKPSSMEDLPPTSNMPQDVK
LPITVSASIDIGGYKPEVRAALHRHYHTTDHKLAVKGSFDEVNQFHTEFTKIVRETETEP
EADWNDNAEAAQSMTHNGMKTHEEPGQKEISFPVPLNHFVYMNQAYRKEMEDIEKRNGVK
INAEVKVSIKEDTQKTGRNVMLTKAHQEFSDLFQKYVVDLDSISTHLTPGDPGDLMNTLK
NIQNEETRLVLNVSANGCVVFGPAQSIMAVEKALGMKTTVMTFGMDHSSTEKASGFAGGP
VLRSPKTPWLIGMDIKDPLLSHGLAMDQTHWDLMISAFHEKITAIKNKFRVDFMVEKSPG
KVKIKTRPTTSHTPPAVSLESHAIRALMHLYQKVATSAMSCHLLDPTHAKTVGDKLEEIL
PRHRCVWAGENYGPCRLIGLPQHLGPAVKELEMMLKRPMFKEEDKHKIEYPGARSSTGAA
MGGAVGDGGATGGPEDNCSICMDRFINKRKLSCSHEFCTDCLRKAVEFSGPRCPLCKDVF
GKVEGDQPEGTMKVKHESYRCIPGYHGYGMIVISYDIPSGKQTKKHSNPGKGFIGAHRIA
YLPDNQEGNEVLKLLERAFNQKLIFTVGTSRTTGTDDCVTWNDIHHKTNIDGGAQGFGYP
DPDYLSRVKSELKAKGIE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtagaggacatggaaacatcacctacagagatgaacagaaaccatgaagtc
tctggaccagaacagcaacggccccatgacctttcgcaaatacagattcatgtgcccaca
ggaacatccagtggtcctgtaacagtgatacagtcacagcctcaacggtctagtgtttct
caaagtgcttttacttacaaggcagaaatatccgaggacgtgtctgaagaagactcatca
gcccgagagactgccgatcggttctctgagacttttggaggagggacaccttcagcaacc
tgtgttaatatcccaagctctgatgacgacccagacctgtatcaagcagataatgacttt
aagcctcattcatcctcttccaaagagatgagtgtggattatcctgctgaaggagataat
ggctctgctagaaacaaacaatcacagcgagaccaacattctcccatcaacccccaaagc
actcaggatgtggacctgaatcaggcaaaggacgagagagaggaaaagcagaccacttta
gatgaggctacagtctatgtcattgtggagtggccttggaaagcaatattgtcatggaag
tctatacttcaaaaaagtctccagtcgtggttgaataataactttaaagaaacagattgc
accgtggaaaggctgaacggaaacgtggccgaagtcaagatacatcccccatcagtcgtt
gaggaccttctgaagctgaaggaaacgcagttgaccttcaaagacaaggccaagacatca
gccactgtgcggtttcacggggctataccaccatcatttaaaccctggaatcaatcaaac
agtaaacccagctcaatggaagacttgcctccaacatccaacatgccacaggatgtcaaa
ctcccaataactgtaagtgctagcattgacatcggtggctacaaacctgaagtacgggct
gcccttcaccgtcattaccacaccaccgatcacaagttggctgtaaaagggagctttgat
gaagtgaaccagttccacacagagtttaccaagatcgtcagggaaacggaaaccgagcca
gaagcagattggaacgataatgcagaagcagcacaaagcatgactcacaatggaatgaag
acccatgaagaacctgggcagaaggaaattagctttccagtcccactgaaccactttgtg
tacatgaatcaggcctaccggaaggagatggaggacatagagaaaagaaatggagtcaaa
atcaatgcagaagtgaaggtgtccatcaaagaggacacacagaaaacaggcagaaatgtt
atgctgaccaaagcccaccaggagttcagtgacctcttccagaagtatgtagttgatttg
gacagcatttccacccatctcacacctggggatccaggagacctcatgaatacgctgaaa
aacatccagaatgaggagactaggctggtactaaatgtgtctgccaatggctgcgttgtg
tttgggccggctcagagcatcatggcagtcgagaaggctcttgggatgaagactacagta
atgacatttggaatggatcacagctccacagagaaagcatctggatttgctggaggaccg
gttttgagatctccaaaaacaccatggttgattgggatggacatcaaagatccacttttg
tcacacgggctggccatggaccagactcactgggatctaatgatatctgcctttcatgag
aaaataacagcaatcaaaaataaatttagagtggatttcatggtggaaaagtctccaggc
aaggtaaaaattaaaaccagacctacaacatcacacactccaccggcagtctctctggaa
agccacgccatcagagctctcatgcacctctaccagaaggttgcgacatcagcgatgagc
tgccacctgctggaccctacccatgcaaagactgtgggggacaagctggaggagatcctc
cctcgacaccgctgtgtctgggcaggagaaaactatggtccctgtaggctgatcggccta
ccgcaacatttgggccctgctgtcaaagagctagagatgatgctgaaaaggcccatgttt
aaagaagaagacaagcacaagattgagtatcctggcgccagatccagcactggagcagcc
atggggggagcagtcggagatggaggagcaacaggagggcctgaagataattgctccata
tgcatggacagatttatcaacaagaggaagttgtcctgcagccatgagttttgtacagat
tgtctgaggaaggcagtggaattctcaggccccagatgtcctttgtgtaaggatgtgttt
ggaaaggtggagggagaccagcctgagggaacaatgaaagtgaaacatgaaagttaccgc
tgcatacctggataccatggctacggcatgatagttatcagctatgatataccaagtgga
aaacagacgaagaaacattccaaccctggaaaaggattcattggggcccatagaatagct
tatctccctgacaaccaggagggcaacgaagtgctgaagttactggagagagctttcaac
cagaagctgattttcacagttgggacctccagaaccactgggacagacgactgtgtgaca
tggaatgacattcaccacaagaccaacatcgatggaggggcacaaggttttggttatcct
gaccctgactacctgagcagagtgaagagtgagctgaaagccaaaggcattgaatga
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