Oncorhynchus tshawytscha (Chinook salmon): 112216824
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Entry
112216824 CDS
T05605
Name
(RefSeq) synapsin-3
KO
K19941
synapsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216824
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112216824
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Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
RimK
DUF6623
Motif
Other DBs
NCBI-GeneID:
112216824
NCBI-ProteinID:
XP_024232689
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Position
LG17:9381496..9513656
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AA seq
536 aa
AA seq
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MNYLRRRLSDSSFVANLPNGYMMDLQSGPRPTPPSSTSNPASPATERRTPPSLPPQAPAS
SSAPAPTTGGFLSSFSSVVKTAQLAQNAAAAAKASAAVAEAAPAAPAKPVIRKPKILLVI
DDLHTDWAKYFRGKKLNGECDIRVEQAEFSEINLASYMNTGCMIDMQAIRGGTKVVRSFK
PDFVLIRQHAYSMTPGEDFRSLVIGLQYGGVASINSLLSIYNFCSKPWVFSHMIELYHSL
GPEKFPLNEQTFYPNHTQMVTTPTFPVVVKMGHAHAGIGKIKVENELDFQDITSVVALAR
TYATSEPYILSKYDIRIQKIGNNYKAYMRTSISGNWKANTGSAMLEQIAMTDRYRAWVDS
CAEMFGGLDICAVKAVHGKDGNDYIIEVMDSSMPLIGEHVEEDRQLITDLVINKMCSVLL
GINTPQPIAVKPQTTQPRRAQGGHRSGSSSPSQSAQGSPQRARSANTSPSQAFQPGPIPP
PVATGPCSQKQPPQLNKSQSLTNTFTETLKGNATDDEAKAETIRSLRQSFASLFSD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctacgcaggcgtctgtccgacagcagctttgtggccaacctccccaacggc
tacatgatggacctgcagagtgggcctcgccctaccccgccctcctccacctccaatccc
gcctccccagccacggagaggcgaacgccccccagtctgccaccacaggccccggcttca
agctcggccccggccccgaccaccgggggtttcctcagctccttctccagcgtggtgaag
accgcccagttggcacagaacgccgcagcagcagccaaggcttcagcggcggtggcagaa
gctgcaccagcagcgcccgccaaacctgtcatacggaagcccaagattctactggtcatc
gacgatctgcacacagactgggccaagtatttccgagggaagaagttgaacggggagtgc
gacatccgggtggagcaggcagagttctcagagatcaacctggcttcgtacatgaacact
gggtgtatgattgatatgcaggccataagaggaggaaccaaagtggtcagatccttcaag
ccagactttgtcctgattcgccagcatgcctacagcatgactccgggcgaagacttcagg
agcctggtgattggccttcaatacgggggagtcgccagcatcaactccctgctctccatc
tacaacttttgcagcaaaccctgggtgttttcccacatgattgagctctaccactccctg
ggcccagagaagttcccactgaacgaacagaccttctaccccaaccacacccagatggtg
acgacaccaacgttccccgtggtggtcaagatgggccatgcccacgccggcattggcaag
atcaaagtggagaacgaacttgacttccaggatattaccagtgtggtggcgctggccaga
acctatgccacctctgagccctacatcctgtccaagtacgacatcaggatccagaaaatc
ggcaacaactacaaggcctacatgaggacgtccatctcaggcaactggaaggctaacaca
ggctcagccatgctggaacagatcgctatgacagacagatatcgtgcgtgggtggactcc
tgtgccgagatgttcgggggccttgacatctgtgctgtgaaagccgtccacgggaaagat
ggcaacgactacattatcgaggtgatggacagttccatgcctctgattggtgagcacgtg
gaggaggacaggcagctgatcactgatctagtgatcaataagatgtgcagcgtgctgctc
gggatcaacacaccacagcccatcgctgtgaagccacagacgacccagccaagaagggcc
caaggtgggcatcgctctggctctagttctccctcccagtcagcccagggttctcctcag
cgagcccgctcagctaacacctctcccagccaggccttccagcccggacccatcccacct
cccgttgccaccggcccctgctcccagaaacaacctcctcaactgaacaaatcccagtcg
ctcaccaacaccttcactgagaccctgaaagggaacgccacggacgacgaggccaaggca
gagaccatccgcagcctgcgccagtccttcgccagcctcttctctgactaa
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