Oncorhynchus tshawytscha (Chinook salmon): 112216853
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Entry
112216853 CDS
T05605
Name
(RefSeq) non-muscle caldesmon isoform X4
KO
K12327
caldesmon
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112216853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112216853
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112216853
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
112216853
NCBI-ProteinID:
XP_024232748
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Position
LG17:complement(10706417..10761248)
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AA seq
592 aa
AA seq
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MDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVGMTNSHSVTETVSVSSSVTSSGGGDDDEQALLERMAKREERRQKRMMEALEREKDQN
PGNAGNHGSGENSVDERSVGRRGRYQDNEEEVEERNCRKKEEEEEGKAAPEEEEAEQGEE
EEEEVEEKPRRSYMREQESIDEKTRNEEDTGEQAVVLNEVKESVNSEAEVEEDAELSDKV
EEPDQLEVEGTTVTPNNETEEDCDIPTIQNGLDVVNEKQNGGLHEETPPKHKKTERTLSR
GSVRSPEAGAEEEQDDAANLEAERKLEELKRRRGDAESEEFERMRRKQQEAEQELEELKK
KREERRKIIEEEERQKKQEEAEKKDREEEERRRMKEEIERRRAEAAEKRQQMGVETVDGE
AKPFKCFSPRGSSLKIGERAEFLNKSAQKSTVKTSHSPVVSKIDNRLEQYTSVAQNKDMR
SPRSGAVDLPMVTDGIRNIKTMWEKGNVFNSPGGGGGTYKEAAGMKIGVAGRINDWLNKT
PESKTPGGRPADLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVANAGMGHE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactttgagcggcgcagagagctcaggaggcagaagcgggaggagatgcgc
ctggaggctgaacggatggccttccagggtagtaatgaggatgaggaggaggctgcaagg
gagcgtagacgcagggcacgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggggatgaccaacagccacagtgtaaccgagactgtgtcggtgtcctcctct
gtgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggccaaa
cgagaggagcgcaggcagaaaaggatgatggaagctctggagcgagagaaggatcagaac
cccggcaatgccggtaaccacggcagcggggagaatagtgtggatgagaggtccgtcggc
cgcaggggccgttaccaagacaacgaagaagaggtggaagagcggaactgccgaaagaag
gaggaggaggaggaggggaaggctgctccggaggaggaagaggctgagcagggagaggaa
gaggaagaagaggtggaggagaaaccgagacgatcctatatgagagaacaggaatccatt
gacgagaaaactagaaacgaggaagatacaggagaacaagcggtggttttaaatgaggtt
aaggaatcagtcaactcagaggcagaggttgaagaagatgctgaattaagtgataaggta
gaggaaccagatcagttagaggtagagggcacgacagtgacaccgaacaatgagactgag
gaagactgtgacataccaacaatccaaaatggcttggatgtggtgaatgaaaagcagaat
ggaggtctgcacgaggagactcctccaaaacacaaaaaaacagaaaggaccctgagccgc
ggcagcgtgcgctccccggaggcgggggcggaggaggagcaggacgacgcggcgaacctg
gaggcggagcgtaagctggaggagctgaaacggcgccgtggcgatgcggagagcgaggag
ttcgagaggatgagacggaagcagcaggaggctgagcaggagctggaggagctgaagaag
aagagggaggagaggaggaagatcatagaagaggaggagagacagaagaaacaggaggag
gccgagaagaaggacagagaggaggaggagaggaggaggatgaaggaggagatagagagg
aggagggcggaggcggccgagaagagacagcagatgggggtggagactgtcgacggagag
gccaaacccttcaaatgcttcagccccagaggatcctccctcaagattggtgaaagggca
gagtttctgaacaagtcggcacagaaaagcacggtgaagacgtctcactctcctgtcgtc
tctaagattgacaacagactggagcagtacacctctgttgcgcagaacaaggatatgcgg
tccccacgctccggtgccgtggacctgccaatggtgacagatgggatacgtaacatcaag
accatgtgggagaaaggcaacgttttcaactcgcccgggggcggcgggggcacgtacaag
gaagcagctgggatgaagataggtgtggcgggccgcatcaacgactggctgaataaaacc
cccgagagcaaaacgccgggaggaaggcccgcggatctgaagccaggagatgtgactaac
aagagaagtctgtgggaaaacaagggatcctccccagccaaggtgactggtagaggggag
aataaatctgttgccaatgcaggtatgggacacgaatga
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