Oncorhynchus tshawytscha (Chinook salmon): 112216902
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Entry
112216902 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 5B-like isoform X4
KO
K20164
DENN domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216902
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112216902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
DGCR6
DUF4437
Motif
Other DBs
NCBI-GeneID:
112216902
NCBI-ProteinID:
XP_024232813
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All DBs
Position
LG17:14392764..14472147
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AA seq
1309 aa
AA seq
DB search
MSGTNAASGAAPCRFAHYFVICGIDTETGLEPDELAALYQWLEADRQGRDPDTAATGENF
EQSPLKRTFKSKVLAHYPENVEWNPFDQDAVNMLCMPKGLSFRTQADSREPQFHSFLITR
EDGSRTYGFVHTFYEEVTSPQICSAMQTLYQMHQAENPSSATPSSSSSSSSSMDSLASSL
DEADSPSSSSCRSAACGGYDASRDTLYVSKALCLITPMPFMHACRRFLSQVHRAVTASLP
PPLPLESYVHNILYEVPLPPPGRSLKFHGVYEPIVCQRPGPGELPLADFPLGQTFPLLGV
ENLVQLFNCTLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDA
PVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHCIELPEDFPQFPNKPELIQELSEVL
LRYGISPVGGAPPTSVPTSTTTLGSVSVSTRHTGLKSQQALRELEDDGRNGNLGGEQLAV
LELLQGNATLERLQALAKRTGVRVEALRGVGGEGEAQGGRTAVDEEELRNAKLNVQLREV
FASRFTMMFADYEAFVIQSAPDLESWLTNREQMHNFDKASFLSDQPEPYLPFLSHFIETQ
MFATFIDNKIMSQWEEKEPLLRVFDGRIDKARLYNVRAPSLRSSNYQRCTILKESAQAIE
QRLLKIDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLSVGPTNNKWSNRTATAQRRKDR
HRQQTEHLTLDNDLKEKYMQEARSLGKNLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMK
TKRMLVEKMGREAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHL
LHYQAREETLEQQQAESPVSNGPERRKSESSLGMPSLRESVIQDMRHIQSMGEIKTDVGR
ARAWIRLSLEKKLLSQHLKRLLSRQALTKKLYKRYAFLRCEEEKEQFLFHLLSLNTVDYF
CFTSVFTTIMIPYRAVIIPIKKLSNAMTTSNPWVCVSGELGDSGVRQITKNVLEITFDCQ
NLGKLTTVQLGHDNSGLLAKWLVDCVMVRNEITGHTYKFPCGRWLGKGVDDGSLERVLIG
ELASPNADEDCGRGCRTPDMQHSPGQTRRASITSMGGRGYKPTSAQIQEAIGEAVNSICK
HFHKPEKERGSLTILLCGEVGLVGALELFFHNGFKSARLFQKTVFVWDFVEKAVAYMESA
DQMGDMQETAEPLGLTCVSLCHYVSAINSSPRNIGKDGKFQLLVCLGARDRLLIQWLPLL
VECPVIQRMYEESALLRDRTTVNDLIAVLQTLHDFPITLEASLVKGIDL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaccaacgcggcttctggagcggcgccttgccgttttgctcactactttgtg
atatgcggaatagacaccgaaactgggctggaaccggacgaattagccgctttgtaccaa
tggctagaggctgaccgccaaggcagggaccccgatacagcagccacaggggagaacttt
gagcagagccccctgaagaggacgttcaagtctaaagtcctggcccactaccctgagaac
gtggagtggaaccccttcgaccaggatgctgtcaacatgctctgtatgcccaaaggcctg
tcgttcaggacacaggcagacagccgcgagccccagttccactccttcctgatcacgcgg
gaggacggctctcgcacttacggcttcgtccacaccttctacgaggaggtgacatcgcct
cagatctgctcggccatgcagaccctctaccagatgcaccaggccgagaacccttcctcc
gccaccccctcctcctcttcctcctcttcctccagtatggactctctggctagcagcctc
gacgaagcagattccccgtcttcatcctcgtgccggtcggcggcgtgcggcggctacgac
gcgtcgcgtgacacgctctatgtctccaaggcgttgtgtctgatcacgcccatgcccttc
atgcacgcctgccgccgtttcctgtcccaggtgcaccgggccgtcacggcctccttgcct
ccacccctccccctggagagctacgtgcacaacatcctgtacgaggtgcccctgccccct
ccggggcgctcgctgaagttccacggggtgtacgagcccattgtgtgtcagcgtcctggg
cccggggagctgcctctggctgacttccctctgggccagaccttccctctgctgggggta
gagaacctggtgcagctgttcaactgtaccctgctggagatgcagattctgctctactca
caggactaccagcggttgatgacagttgcggagggtatcaccaccctgctcttcccgttc
cagtggcagcatgtctacgtgcccatcctacccgcgtcactgctgcacttcctggatgcc
cccgtgccctacctcatgggcctgcagtccaaggagggcaccgatcgctccaaactagag
ctgccacaggaggctaacctctgctttgtggacattgacaaccactgtatcgagctgcct
gaagacttcccccagttccctaacaaaccagagttaatccaggagctcagcgaagtcctc
ctccgctacggcatatccccagtggggggcgctcctccaacctctgtccccacctccacc
accacccttgggtctgtctctgtctctacccgtcacactggtctgaagagccaacaggcc
ctgagggagctagaggacgatgggaggaatgggaacctaggaggggaacagttagctgtg
ttggagcttctccaagggaacgctactctggaaagactccaggctctggctaagagaacg
ggggtccgcgtggaagccctgaggggggtagggggtgagggagaggctcagggggggagg
acagcagtcgatgaggaggagctgaggaacgctaagctgaatgtacagctgagggaggtg
ttcgctagcaggtttaccatgatgttcgcagactatgaggccttcgtcatccagagcgct
ccagacctggagtcctggctcaccaaccgagagcagatgcacaactttgataaggcatcc
ttcctgtctgaccagccggagccctacctgcccttcctgtcccacttcatcgagacccag
atgttcgccaccttcatcgacaacaagatcatgtcccaatgggaggagaaggagccgctg
ctccgcgtgttcgacggacgcatcgataaagctcgtctatacaatgttagagccccaagt
ctgcgatcctccaactaccagagatgcaccatcctcaaggagtcagcccaggccatcgaa
cagcggctgctgaagatcgaccacacagccatccacccccacctgttggatatgaagatt
ggacagggcaaatatgaacaaggcttcttccccaaactgcagtctgatgtgctctcagtc
ggacccaccaataacaagtggtccaatcgtaccgctacggctcagcgcaggaaagaccgt
cacagacaacaaacagaacacttgactctagataacgacctcaaagagaagtacatgcag
gaggctcggagcctggggaagaacctccgtcagcccaagctgtctgacctctcacctgcc
gtcatcgctcagaccaactggaagtttgtagagggactactcaaggagtgtcgcatgaag
actaagcgtatgttggtggagaagatgggcagggaggcggtggagctgggtcatggggag
gcaaacatcacaggtctggaggagaacactctcatcgcctccctctgtgacctgctagag
aggatctggagccatggcctgcaggtcaaacaggggaagtcagctctgtggtcccacctt
ctgcactaccaggccagagaggagacactggagcagcagcaggcagagtcaccagtgtca
aatggtccagagagacgaaagtctgagtcgtcattagggatgccatcgctgcgagagtcc
gtcatacaggatatgaggcacatccagagtatgggggagataaagacggatgtgggcaga
gcgagggcctggatccgtctttctctggagaagaagctgctctcacaacacctcaaacgg
ttgctgtcccgccaagccttaaccaagaagttgtataagcgctacgccttcctgcgctgt
gaggaggagaaggagcagttcctgtttcacctgctctccctcaacactgtcgactacttt
tgtttcaccagtgtcttcaccaccatcatgatcccgtaccgcgccgtcatcatcccaatc
aagaagctgagcaacgccatgacgacctccaacccgtgggtgtgtgtgtcgggtgagctg
ggcgactcgggcgtcaggcagatcaccaagaacgtcctggagataaccttcgattgtcag
aacctgggtaagctgactacagtccagttgggtcatgataactctgggctgctggctaaa
tggttggtggactgtgtcatggtccgcaacgagatcacaggacacacctacaagttcccg
tgtgggcggtggcttggcaaaggcgtggacgacggcagtctggagcgtgttctgattggt
gagctggcatcgcccaacgccgatgaggattgtgggagagggtgtcgcacgcctgacatg
cagcattcgccgggtcagaccagacgcgccagcatcacctcgatgggaggacgcggatac
aagcccacctccgctcaaatccaggaggccattggcgaggcagtgaacagcatctgcaaa
cacttccacaagcctgagaaagagaggggcagtctgaccatcctgctgtgtggtgaggtc
ggtctggtcggggctctggagctgttcttccacaacggcttcaagtccgcccgcctcttc
cagaagactgtctttgtctgggactttgtggagaaggcggtggcttacatggagtcagca
gaccagatgggggacatgcaggagactgctgagcccctgggcctgacctgtgtctctctc
tgtcactatgtcagtgccatcaactcctcgcccaggaacattggcaaggatggcaagttc
cagctgcttgtctgcctgggggccagagatcgtctgctgattcagtggctccctctgttg
gtggagtgtccagtgatccagcggatgtatgaggagtctgctctgctgcgggaccggacc
acggtcaacgatctcattgctgtcctgcagactctccacgacttccccatcaccctggag
gcctcgctcgtcaagggcattgacctttaa
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