Oncorhynchus tshawytscha (Chinook salmon): 112216928
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Entry
112216928 CDS
T05605
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112216928
04137 Mitophagy - animal
112216928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112216928
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112216928
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112216928
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112216928
Xenophagy
Cargo receptors
112216928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CENP-F_leu_zip
DUF4248
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
112216928
NCBI-ProteinID:
XP_042156191
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All DBs
Position
LG17:complement(15687272..15706842)
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AA seq
569 aa
AA seq
DB search
MASSSHMVNGDVSRGPSSHPGHSPTTGTLEETLQQMNRLIQENRDLKEALKQTNVSMKER
FEGLSVWREKQREEKEFLEERLDEARGRVEALSSHNQELSMKVEELEGEGKGQAETANQN
AELEALHAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEIRIARDDTGKYLYHNERD
PRYDMSVSRQESEELTVSQLLQSLRKETQRVERLQIELQATRSRITELEVKETNTESSTQ
TSLLPEVVSPALANTACGTEPEPEEEPQQNSGKEKLLDQNCQYVGLLPVLCQAASEVEDL
KAQMMTLFNELQQAQSKLDEAEGLKMNLQDRCRDVERDVVTLKAQLVEKQEVQSENDRLK
LQVDSMKAQSQLEQRKAGEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQ
TRLDAAEKALAAKQQQIDVMKQEICQKEKELETISVFQAQAEVYSSDFYAERAAREKIHE
EKERLFAQLEFVKKQNTQLQDEMDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQG
NIPEHVCPKCNEILPDLDSLQIHIMDCII
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagctcccacatggtgaacggggacgtctcccggggtccgagctcccacccc
ggccacagccccaccacaggaaccctggaggaaacgctgcagcagatgaaccgcctcatc
caggagaaccgagacctgaaggaggcactgaagcaaaccaacgtgtcgatgaaggagcgc
ttcgagggtttgtctgtgtggagggagaagcagagggaggagaaggagttcctggaggag
aggcttgatgaggcgcgtggccgtgtggaggccctctcctcgcacaaccaggagcttagc
atgaaggtggaggagctggagggtgaagggaagggacaggccgagacagccaatcagaat
gcagaactggaggcgctgcatgcccagctggtgcgtctgcaggcagagaagagtgacctg
gtggccatgaactctgaactccagctcaagacaggtcaggggtcagaggacgactccttc
atagagatcaggattgctagagatgatactggaaagtacctgtatcataatgaaagggac
cccaggtatgacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctg
ctccagtccctgaggaaggagacccagagggtggagaggctacaaatcgagctccaggct
accagatccagaatcacagagctggaggtgaaagaaactaacacggagagctccacacag
acctcactactgccagaggtggtttccccagcactagccaacacagcatgtggtactgag
ccagaaccagaggaggagccccaacagaactctgggaaggagaagcttcttgatcagaac
tgtcagtatgttggactgttgcctgttctgtgtcaggctgcgtcagaggtggaggatctg
aaggctcagatgatgactctgtttaatgagctacagcaggctcagagcaaactggatgag
gcagagggcttgaagatgaacctgcaggacagatgtagggatgtggagcgtgacgtggtg
actctgaaagcccagctggtagagaagcaggaggtacagagtgagaatgacagactgaag
ctgcaggtggacagtatgaaggcccagagccagctagagcagaggaaggctggagaggag
aggactaacctgacccagctgaaggatgcctacaccaagctattcgaggactacaatgag
ttgaagcaagagagcaagaacagagagccactggtcactaaggaggtgggagacctgcag
accagactggacgcagcagagaaggccctggctgctaagcaacagcagatagatgttatg
aagcaggagatatgtcagaaggagaaggaactggagaccatctctgtgttccaggctcag
gcggaggtgtactcctctgacttctacgcggagcgagcagctcgggagaagattcacgag
gagaaggaacgtctgtttgctcagctggagtttgtcaagaaacagaacactcagctacag
gacgagatggactcactgggcaggcaatctctgagcgatatgcagagaagacacatgcca
cgtggaggcaacatgcagggagccagaggtggtgatgccagggactggcagcagcagggg
aatataccggagcacgtctgccccaagtgtaacgagatcctaccagacctggatagcctg
cagattcacatcatggactgcatcatctga
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