KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112216936
Entry
112216936         CDS       T05605                                 
Name
(RefSeq) splicing factor 45
  KO
K12840  splicing factor 45
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112216936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112216936
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112216936
 Complex B
    112216936
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 112216936
NCBI-ProteinID: XP_024232861
LinkDB
Position
LG17:15840857..15847209
AA seq 430 aa
MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTAPSGFPSGDALIPLADEYDPMFPNDYEKVVKRHREE
RQRQREQERLKEIEDREKKRKDRHEGSSAPSGFSRFPTAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYEDEMRPSRGSKAAIPPPMYEDSERPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDATEKTPGSSSQT
AAAEPLGWGSASIVDPSKKSEANPLTEILKCPTKVVLLRNMVGRGEVDEDLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRVLDLGEQM
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtcgctttacgacgacatgggtgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcaatcacagctgaaagtaaagaaggcagctctgact
caggctaagagtcagcggatgaagcagggtactgtcctggcaccagttattgacttaaag
agaggaggttcggctgatgacagacagataatagacacacccccacacattgcagcagga
ctcaaggacacagcacccagcgggttcccctcgggggacgcgctaatccccctggctgat
gagtatgaccccatgttccccaacgactacgagaaggtggtgaagagacaccgcgaggag
aggcagagacagagagagcaggaacgactgaaggagatagaggacagagagaagaagagg
aaggacagacacgagggcagcagcgctccgagtggattctcccgcttccccacggcagag
ggagagtctgatgaggaggaggaggactatgagaaggagaagaggaaaaggagtatgggt
ggagcagccatcgccccaccctcctcactcgtggatagtagagacagctcgtcatactcc
tatgaggatgagatgcgaccctcccgtggttctaaagcagccatccctccccccatgtac
gaggactccgaacgcccccgctcaccacctggcggtcccaccaactcattcctggccaac
atgggagggaccgtggcccataagatcatgcagaagtatggcttccgggagggccagggg
ctgggcaaacacgagcagggtctcagcacggccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacgccactgagaagacaccaggatccagtagccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagtggacccctccaagaagtcg
gaggccaaccccctcacagagatcctcaaatgccccaccaaagtcgtgctgctacggaac
atggtgggcagaggagaggtggatgaagatttggaaggggagaccaaagaagagtgtgag
aaatacggcaaggtcatcaagtgtgtcatctttgagattgctcaggtgacagacgatgaa
gcagtgaggatatttctggagtttgagagagtcgagtcagccatcaaagctgtggtggat
ctgaacgggaggttctttggtggtcgggtggtaaaagcctgtttctataaccaggataag
ttcagagtgttggacctgggagagcagatgtga

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