Oncorhynchus tshawytscha (Chinook salmon): 112216953
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Entry
112216953 CDS
T05605
Name
(RefSeq) podocalyxin isoform X1
KO
K06817
podocalyxin-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112216953
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Gene cluster
GFIT
Motif
Pfam:
CD34_antigen
DUF6377
Motif
Other DBs
NCBI-GeneID:
112216953
NCBI-ProteinID:
XP_024232887
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Position
LG17:17414653..17431068
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AA seq
456 aa
AA seq
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MKQSCVKKNRMETIMRITWALLPLGLLLHCTDANPKQQPSSSSYIASNTTTITAGVTATP
SPISTQVTSVVSNTATLSPISTQVTSVVSNTATLSPISTQVTSVVSNTATLSPISTQVTS
VVSNTATLSPISTQVTSVVSNTATLSPISTHKVTSVVSNTATLSPISTHKVTSVVSNTAR
ITTASITPGTSIVTAVGTAGTGASGSSGTLTQTTPDTTEEVTEVSTTTSAGPTPWSASSF
PSHPPSTSSRVGSGSSLATTTTSTQGWMVSTTTAETTTPPKSFTFVKSQNGENYERKDLE
ELCRQLMSQMHDANCTLTVRENNGHTTFDSVVMTGKVDNSVVQQYYEEITRKPSDNMTLI
AILASCGALLAMIVGFAIYASYHRKSYRKNLQQHLTEELQTVEDGYHDNPTLEVMEVQPE
MQEKKVALYGEFNDSWIVPIDSLLKEDMPDEEDTHL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagttgcgtaaaaaaaaacagaatggaaacgataatgcgaatcacgtgggca
cttcttccacttggtcttctacttcactgtactgatgctaatccaaagcaacaaccctca
tcctcttcatatatagcctccaacaccaccacaattacagctggcgtcacagccaccccg
tcaccgatatcaactcaggtgactagtgtagtctctaacacagccaccctgtcaccgata
tcaactcaggtgactagtgtagtctctaacacagccaccctgtcaccgatatcaactcag
gtgactagtgtagtctctaacacagccaccctgtcaccgatatcaactcaggtgactagt
gtagtctctaacacagccaccctgtcaccgatatcaactcaggtgactagtgtagtctct
aacacagccaccctgtcaccgatatcaactcacaaggtgactagtgtagtctctaacaca
gccaccctgtcaccgatatcaactcacaaggtgactagtgtagtctctaacacagccaga
atcacaacagccagcatcacacccgggaccagcattgttactgccgtgggtactgctgga
acaggggcctctgggtcctcaggaaccctcactcagaccaccccggacactacagaagaa
gtcacagaggtttcaactacaacatcggctggcccaaccccatggtcagcatcgtccttt
ccttcccatcccccctccacatccagccgtgtgggttcaggcagcagtcttgctaccacc
acgaccagcacacagggatggatggtgtctacaaccacggctgagactacaactcctccc
aagagctttacgtttgtcaagtcccaaaatggagagaattacgagaggaaggacctggag
gaactgtgtcgacagctgatgtctcagatgcacgacgctaactgtactctgactgtgaga
gagaacaacggacacactacctttgacagcgtggtaatgaccggtaaagtggacaattct
gtcgtgcagcaatactacgaggaaatcaccagaaaaccaagcgacaacatgaccctgatt
gccatcttggcatcctgcggagctctgctggccatgattgtaggcttcgccatctacgcc
tcataccaccgcaagtcctatcggaagaacctccaacaacacctgacggaggagctgcag
acagtagaggacggttaccatgacaaccccacattggaggtgatggaggtgcagccggag
atgcaggagaagaaggtggccttgtacggagagttcaacgacagctggattgtccccatc
gacagcctgctcaaagaggacatgccagacgaggaggacactcacttgtag
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