Oncorhynchus tshawytscha (Chinook salmon): 112216996
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Entry
112216996 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Spi-C
KO
K09440
transcription factor Spi-C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112216996
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
112216996
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Gene cluster
GFIT
Motif
Pfam:
Ets
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
112216996
NCBI-ProteinID:
XP_024232952
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Position
LG15:complement(5939305..5941542)
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AA seq
263 aa
AA seq
DB search
MISLDNDINQHFQDAIDVIQRHSDDPYCDTEYKYFEPPMRSSIMCCYPITHPSDVPGPYD
WNEQTSWPHVVPYGSLGPSVTMDYPQFYSIAPPPRSGKGRKKLRLYEYLHEALGDPNTAD
SIQWTDRGSGTFHFISKNKEKLAECWGKRKGNRKTMTYQKMARALRNYSRTGEIVKVRRK
LTYQFNPSIIQRLGGISHVIPRWAPRAGHPGREVLLHQQHAPAEQAYYGSAAAPDWHNWY
GHYSLQGDCDLATSFTSSTVTKA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgatctcactggataatgacatcaaccagcacttccaggatgcaattgatgtgattcaa
cggcactctgacgatccgtattgtgatacagagtataagtactttgagcctccaatgcga
tcgagcataatgtgctgctaccccatcacccacccttctgatgtgccagggccatatgac
tggaatgagcagacgtcatggcctcatgttgttccttacggctcactgggtccgtctgtg
accatggactacccccagttctactccatcgcaccgccaccgaggagcggcaaaggtcgc
aagaagctgcgtctttatgagtacctgcatgaggctctgggcgatcccaacacggctgac
tccatccagtggacggaccgtggcagcggcaccttccacttcatctccaagaacaaagag
aagttggccgagtgctggggcaagcgcaagggcaaccgcaagaccatgacctatcagaag
atggcacgggcgctgcgcaactacagccgaacgggcgagatcgtaaaggtgcgccgcaaa
ctcacctaccagttcaacccgtcgatcatccagaggcttgggggcatcagtcacgtcatt
ccccgctgggcaccccgggctggccaccctgggcgggaggtgctcctccaccagcagcat
gccccagctgaacaggcttactatggctctgctgctgcacctgactggcacaactggtat
ggacattactccctccagggagactgtgatcttgccacaagcttcacttcatccacagtc
accaaggcgtga
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