Oncorhynchus tshawytscha (Chinook salmon): 112217035
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Entry
112217035 CDS
T05605
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217035
Membrane trafficking [BR:
otw04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112217035
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112217035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
112217035
NCBI-ProteinID:
XP_042153271
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All DBs
Position
LG02:complement(35244115..35367844)
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AA seq
1105 aa
AA seq
DB search
MSSQTRVKKDKEIIGEYETQVKEIRNQLVEQFKCLEQQSESRIQLLQDLQDFFRRKAEIQ
LEYSRSLEKLAERFSNKIRSSREHHQFKKDQHLLSSVNCWYLVLNQTRRESRDHATLNDI
YTNNVIVRLAQISEDVIRLFKKSKDIGIQMHEELVKVTNELYTVMKTYHMYHTESISAES
KLKDAEKQEEKQFSKSGDLNVNLLRHEDRPQRRSSVRKIEKMKEKRQAKYSENKLKCTKA
RNDYLLNLAATNAVVAKYYIHDVSDMIDCCDLGYHASLARTFRTYLSAEYNLETSRHEGL
DIMENAVDNLDSRSDKHKIMDMHNQVFCPPMCFEYLPHMGDEVCQVSAQQPVQTELLMRY
HQLQSRLATLKIENEEVRKTLDATMQMLQDMLTVEDFDVSDAFQHSRSTESIKSVASETY
MSKLNVAKRRANQQETEVFYFTKFKEFLNGSNLIIKLQAKHDLLKQTLGEGERAECGTTR
PPTLPPKPQKMRKPRPRSVYNHKLFNGNMETFIKDSGQPIPLVVESCIRHINLYGLQQQG
IFRVPGSQVEVNDIKNSFERGEDPLIDDQNEHDINSVAGVLKLYFRGLENPLFPKERFLD
LMSTIKLESGAERAHHVQQIIVTLPRAVIIVMRYLFAFLNHLSQYSDENMMDPYNLAICF
GPTLMPIPDGQDPVAIQAHVNEVIKTIIIHNEVIFPSHRELDGPVYEKCMTGGEEYCDSP
HSEPGTIDEADNGTEPHTSEDEVEQIEAIAKFDYVGRTPRELSFKKGASLLLYHRASEDW
WEGRHNGVDGLIPHQYIVVQDLDDAFSDNLSQKADSEASSGPLLDDKASFKNDVPSPCEH
SPDSNFGGVMGRVRLPSDEAATPRRHSGETHSPPRGTDTPPRAAACPSSPHKVAVSRSRM
ESPEKRRLGTFGSAGSINYADRKAYPEGHPLRPVAGATRHSSLGDHKSLGAETLAEDIKK
TMTTALHELRELERQNTAKQAPDVVLDTLDTTMKNPVNSEPGSPLHTIMIRDPDAAMRRS
SSSTSEMMSTFKPTLSARLAGAQLRPPPMRPVRPPPTGHRSSSSSSSGVGSPAVTPTEKI
FPNSTATASSAANAANAAGDKSGTM
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaaccagagtcaagaaggacaaggagatcataggagaatatgaaacgcaa
gtcaaagagatccgtaaccagctggtggagcagttcaaatgcctggagcagcagtccgag
tctcgtatccagctgctacaggacctgcaggacttcttccgccgcaaggctgagatccag
ctggagtactcccgcagcctggagaaactggccgagcgcttctccaacaagatccgcagc
tccagagagcaccaccagttcaagaaagaccagcacctgctgtccagtgtgaactgctgg
tacctggtactgaaccagaccaggagggaaagcagggaccacgccaccctcaacgacatc
tacaccaacaatgtcatcgtccgcctcgcccaaatcagcgaggacgtcatccgcctcttc
aagaagagcaaggacattgggattcagatgcacgaggagctggtaaaagtgaccaacgaa
ctctacactgtgatgaagacctaccacatgtaccacacggagagtatcagcgctgagagc
aagctgaaggatgctgagaagcaggaggagaagcagttcagtaagtctggagacctcaat
gtcaacctgctgcgccacgaggaccggccccagagacgcagctccgtcaggaagatcgag
aagatgaaggagaagagacaagccaagtactcagagaacaagctgaagtgcactaaagcc
cgcaatgactatttgttgaacctggcagcaacgaatgccgttgtggcgaaatactacatt
cacgatgtctctgatatgattgattgctgtgacctgggctaccacgccagccttgcgcgt
accttcaggacctacctgtcagctgagtacaacctggagacaagtcgccacgagggcctg
gacatcatggagaacgccgtggacaacctggactcccgcagcgacaagcacaagatcatg
gacatgcacaaccaggtgttctgccctcccatgtgcttcgagtacctgccccacatgggg
gacgaggtgtgccaggtgagtgcccagcagcctgtgcagactgagctcctgatgcgctac
caccagctgcagtcccgtctggccacgctcaagatcgagaacgaagaggtgaggaagact
ctggacgccaccatgcagatgctccaggacatgctgactgtggaggactttgatgtgtct
gatgccttccagcatagccgctccactgagtccatcaaatcggtggcctccgagacctac
atgagcaaactgaacgtggccaagagacgggccaaccagcaggagacagaggtcttctac
ttcactaagttcaaggagttcctgaacggcagcaatctcatcattaaactgcaggccaag
catgacctcctgaagcagacattgggagaaggagaaagggctgaatgtgggactacgagg
ccccccactctcccccctaaaccacagaaaatgcggaagcctaggccgcgctcagtctat
aaccataagctgtttaacggcaatatggagacattcatcaaggactccggtcaacctatt
ccacttgtggtggagagctgtattcgacacatcaatttgtatgggctccagcagcagggc
atatttcgcgtgcctggatcccaggtggaggtcaatgatattaaaaactcatttgagaga
ggcgaagacccattgattgatgaccagaatgaacatgacatcaactcagtggcaggggtc
ctcaagctgtacttcaggggcctggagaaccctctgttccccaaggaacgcttcctggac
ctcatgtctactatcaagctggagtctggagctgagagagcgcatcacgtccagcagatt
attgtgactcttcctcgcgccgttatcattgtcatgagatacctgttcgctttcctcaat
catctgtcccagtacagtgatgagaacatgatggatccctataacctggccatctgcttt
ggccccaccctgatgcccatccccgacggacaggaccctgtagccatccaggcacacgtc
aatgaggtcataaagaccatcatcatccacaacgaggtcatcttccccagccaccgcgag
ctggacgggccggtctatgagaagtgcatgactggaggagaggagtactgtgacagcccc
cacagtgagccaggcaccatcgatgaggctgacaatgggactgagccacacaccagtgaa
gacgaggtggagcagattgaggccatagctaagtttgactatgtgggacgcaccccccgg
gagctgtcctttaagaagggggcgtcgctgctgctgtaccaccgcgcctctgaggactgg
tgggagggccggcacaatggcgtggacggactgatcccacatcagtacatagtggtgcag
gacctggatgatgcgttctcggataatctcagtcagaaggcggacagcgaggcgagcagt
ggaccactgctggatgacaaggcctcattcaaaaacgacgttccatcaccgtgtgaacac
tcccccgactccaactttggaggagtcatggggagggtgcggctaccttctgacgaggcc
gccacccctcgacgccacagtggagagacccacagccctcctcggggcactgacacaccc
ccacgggccgcagcctgtcccagcagcccccacaaggtggcagttagcaggagccgcatg
gaaagcccagagaagaggcgcctgggaacatttggcagcgcgggcagcatcaactacgct
gacaggaaagcctatcctgagggccaccccctgaggcctgtagcaggggccacacgccac
agtagcctgggggaccacaagtcactgggggctgagacactggcagaggacataaagaag
accatgaccacggccctacatgagctgcgtgaactggagcgccagaacacggccaagcag
gctccagacgtggtgctggacaccctggataccaccatgaagaaccctgtgaactcagag
cctggcagccccctccacaccatcatgattcgcgacccagacgccgccatgcgccgcagc
agcagttccacctctgagatgatgagcacctttaagcccaccctgtcagcccgtctggcc
ggagcccagctgcgccccccgcccatgaggcccgtccgcccgccccccaccggtcaccgc
tcctccagctccagttcctctggggtgggaagccctgctgtcacgcccaccgagaagatc
ttccccaacagcactgccacggctagctctgcagccaatgcagctaacgcagccggggac
aagtccggcaccatgtag
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integrated database retrieval system
