Oncorhynchus tshawytscha (Chinook salmon): 112217039
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Entry
112217039 CDS
T05605
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217039
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112217039
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
HR1
Motif
Other DBs
NCBI-GeneID:
112217039
NCBI-ProteinID:
XP_024233042
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All DBs
Position
LG17:complement(19933018..19964198)
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AA seq
899 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMGYSNGLFDCQSPTSPFLGSLRALHLLEDLRAALE
MMDQDEREGLRCQVPDTTADGLVEWLQQGQLTNGNGSAVIYQDRLSRVESDKECLVLQVS
VLSDQVEVQGEKIRDLDMCLEEHREKLDATEETLQQEFLTRSTLETQKLELMTEVSSLKL
KLTTVSRDRRDSEGLYQEVNDLRFRVTDMENERLQCEKKLKSTKEELQTLQRQLEELRRL
RDQATQGVLTPDRTDGEKDVDVLRMKRAMDSLMSASNDKDRRIEELQESITRYKKVQDLM
KDTLNEDNYDDIQDDRFPSIQVAMEADQVTLAVGEETGRSCDEIPSIGVFSELVQESLIQ
KPDTDSPPEVPPHSAGSLGHINSNTEQTTVEVPSPPSNPSSNESFGNKKARSSFGRGFFK
MRGGKRTSSAPHLDRSRSASAPTLAETERNGTDHLDLAGAPPDKPQGGDSSQTLPSSPEA
KKKSRGFKRFLGRLKRSHSTSLDLEETEFRRGGVRATASPRLGWSRDLQHSPNDVDTPFA
QWSKEQVCVWLQEQGLGLHVAQAQQWIRSGFTLLQASQHDLEKELGIKQPLHRKKLQLAL
QALGSEEDVSKAKLDHNWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDDLLSLKVGS
VLHHLSIKRAIQILRLNFYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYA
PNLRGSGVHGGVMVLEPRFNVESLALLLNIPPNKTLLRRHLATHFHLLIGSAAQRSKQEC
LENPDYTLLTATAKVKPRKLSFGGFGTLRKKRQEDSEEYVCPMDVEMPKNSSFQGGLRSY
EDDLDQLEQMEDSEGAVRQIGAFSEEINNLTSMLKEDEFFSEVSSRSPEASVTDDDSNM
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatgccagcgagatgttggcagccgccttggagcaaatggatgggatcata
gcaggctccaaggccatgggctactccaatgggctgtttgactgccagtcgcccacctct
cccttcctgggaagcctgcgggcgctgcacctgctggaggacctgcgggcggcactggag
atgatggaccaggatgagcgggagggcctccgctgccaggtccctgacaccaccgccgac
ggcctagtggagtggctgcagcagggtcagttgaccaacggaaatggctccgccgtgatc
taccaggatcgactgtcacgggtggagagcgataaggagtgtctcgtcctccaggtgagt
gttctctcagaccaggtggaggtgcagggggagaagatcagggatctggacatgtgtctg
gaggagcacagagagaaacttgacgccactgaagaaacgctgcagcaggagttcttgacc
aggtccaccctggagacccagaagctggagctgatgaccgaggtgtctagtctgaaactg
aagctgaccactgtgtcgagagatcgcagggatagtgaggggttgtaccaggaagtcaat
gacctgcggttcagggtgaccgatatggagaatgaaagactgcagtgtgagaagaaactt
aaatccaccaaagaggaactgcagactcttcagaggcagctggaggagctgaggaggcta
agagaccaggctacacagggagtgctgaccccagacagaacagatggagagaaagatgtg
gacgtgctgaggatgaagagggccatggattccctgatgtcagctagcaatgacaaggac
cggaggatcgaggagcttcaggagtctatcacacggtacaagaaggtccaggacttgatg
aaagacacactgaatgaagacaattatgatgacatccaggatgacagattcccctccatt
caggtcgccatggaggcagaccaggtcacactggcggttggggaggagacaggaaggagc
tgtgacgagattccatctattggagtgttttcagagctggtgcaggagagcctgatacag
aaaccagacacagacagtccaccagaagtcccaccacattcagcaggtagcctgggccac
ataaacagcaacacagagcagaccacagttgaggtgcccagccccccatcaaaccccagc
agtaatgaaagctttgggaacaagaaggcccgctcctcctttggacgtggtttcttcaag
atgcgtggaggcaagaggacgtccagcgccccacatctggatcgcagccggagtgcgagt
gcgcctacgttggctgagaccgagcgtaatggcacagaccacttggacttggctggtgcc
ccaccagacaaacctcagggaggagacagcagccagaccctaccttcctcaccagaggcc
aagaagaagtccagaggctttaagaggttcttaggcaggctgaagagaagtcactccacc
tcgctagacctggaggagactgagttcaggaggggaggagtcagagccacggccagcccc
cgactgggctggtcacgtgacctgcagcacagccccaatgatgtggacactccctttgct
cagtggagtaaggagcaggtgtgtgtgtggctgcaggagcagggcctggggctgcacgtg
gctcaagcccagcagtggatccgctcaggattcaccctgctgcaggcctcccagcacgac
ctggagaaggagttggggatcaaacagcccctccacaggaagaagctgcagctggctctc
caggcactgggatcagaggaggatgtcagcaaggccaaactggaccacaactgggtgacc
agatggcttgatgacattggtctgccgcagtataagagccagtttgatgaggggagggtc
gatgggcgaatgctacactacatgactgtggatgacctgctgtctctaaaagtgggcagt
gttctccaccacctcagcatcaagagagccatccagatcctccggctcaacttctacgag
cccaactgcctccgccgacggccctctgacgagaataacatcacgccagcggagatctcc
cagtggaccaatcacagagtgatggagtggctgagatcagtggacctggctgagtacgct
cctaacctgaggggcagcggtgtgcacgggggggtcatggtgctggagcctcgcttcaac
gtggagtccctagcccttctgctcaacatccctcccaacaagaccctgctgcgccgccac
ctggccacccacttccacctgctcatcggctccgctgcccagcgcagcaaacaggagtgt
ctggagaaccctgactacaccctgctcactgccaccgccaaggtcaagcccagaaagctg
tcattcggtggcttcgggaccctgcgtaagaaacgccaggaggacagcgaggagtacgtg
tgccccatggatgtggagatgcccaagaacagcagcttccaggggggcctgaggagctac
gaggatgacctggaccagttggagcagatggaagactcggaaggggctgtgaggcagata
ggagcattttctgaggaaatcaacaacctgacgagcatgctgaaggaagatgagttcttc
agcgaggtctcctctcgctcccccgaggccagtgtcaccgatgacgactccaacatgtga
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