Oncorhynchus tshawytscha (Chinook salmon): 112217161
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Entry
112217161 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112217161
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112217161
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112217161
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112217161
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112217161
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112217161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
GUN4_N
PTP-NADK
Y_phosphatase3
PTPlike_phytase
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
112217161
NCBI-ProteinID:
XP_042156105
UniProt:
A0AAZ3SS68
LinkDB
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Position
LG17:11524855..11585693
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AA seq
1433 aa
AA seq
DB search
MELTVSRVLISIAQLLVFCQIVALTEAYFKAQRKFTDDIDWSYTGQLNQKIWGKRYPACN
NARQSPIDIDETFTQVRVEYQGLQLEGWEKNTPETTTINNDGNTVVLGLDGEYYVSGGGL
STRFRLGRMTFHWGRCNASSDGSEHSLNGLKFPLEVQIFCYESDLYPSIDDAVKDGGRIA
ALAVLFETSLDNNDNYNTIIEGVNSVSRFGKTENVEPFSLLALLPNSTDKYYMYNGSLTS
PPCSETVEWIVFKNTVPISETQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQLFLGQVF
SSYTGTEEVLTPMCSSAPQNMQADAQNDTTVMVMWERPRVVYDTTIDWYSVTYQRLQDQN
QPKHEYRTDGDQDVGAIIPGLLSNSSYVVQVVAVCTNGLTGRWSDQIIVDMPQEYPAIES
DPGNTEPEDILEPVDILEQVDQNPVEESRTREDRQQIFPDQPSTTAASQVSSVPVPPGTR
DDQNRIDQNPVNQSRMDKPKKDQTRKDKKKQRIPPHRPFTRAASNGKSATWVTMVTDQPG
FLIPVSRMTSPPPVRRQITEEASLSWSPQQIRNQNRGSAAQKPDVSGIGLLPPESDMYTP
PGGGMVVTDVYYEDVVNSTALEFTTMPSKTTLNKTLDYRVLSPVTARPKVTMKGEDRGLV
LTSRRSDNRVSTVTRATPIQQTPVSVTSTPSVPWIRPRTSSPSNSLSPAYGSSTTSGLVK
VLQLTTQPIFTEISNSSHESRVQMVGSVAEREKRTVVPLAVVSTLTIICLLVLVGILIYW
RNCFQTVDFFTEDTASPKVISALSSPLLPATEEHEALSVKQFVKHVAELHQTNTFSKDFE
IVTECYEEVQSCTVEMGITTDSSNHPDNKNKNRYINIMAYDHSRVKLLEEGEGGDYINAN
FVDGFERTRAYIAAQGPLKSGTEDFWRMVWQENVGVIVMITNLLEKGRRKCDQYWPMENQ
EEYGYFLVTLKDTKTLAYYTRRTFTVRDTSQKASQRGRCAERTVVQYHYTQWPDMGVPEY
TLPVISFVRASSQARTQDMGPVLVHCSAGVGRTGTYIVLDSMLQQIQDQGTVNILGFLKH
VRTQRNYLVQTEEQYVFIHDALVEAIISRDTLVTSDLVHSYVTDLLTTGPSGRTRMERQF
KLVSQRRARQADYAAALREGNADKNRTSSLMPVERSRVCLSCPVEGESSDYINASYIMGY
HKSREFILTQCPLPSTVSDFWRMVWDHNSQLIISLPDTHTAQSEGEESCVYWPSKDQPIS
CEGFIVSFTGEDHMCLANEERLVVHDFLLEATQDNYVLEVRQYMSPCWPNPESPVSSTFQ
LLNIITEDSRRREGTIVVHDRLGGSMAGLFCALTTLAQQLEQQGSVDVYQVARMTNLMRP
GVFNDMEQYQFMYRAVLSLVDSQEDQRALQSPETNGSVPLGATTAAESLESLM
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgtatccagagtgctgatttccattgcgcagctcctggttttctgccag
atagtggccttgacagaggcgtacttcaaggcccagagaaaattcacagacgacatcgac
tggtcctacacaggccagttgaaccagaagatctggggtaagaggtacccggcgtgcaac
aatgcccgtcagtcacccatcgacatcgacgagacgttcacccaggtccgggtggagtac
cagggcctgcagctggagggctgggagaagaacaccccagagaccaccaccatcaacaac
gacggcaacacggtggtgctaggcctggacggggagtactatgtgagtggcggtggtctg
agcaccaggttcaggttggggaggatgacgttccactggggacgctgcaacgcctcctca
gacggatcagaacacagcctcaacggactcaagttccccctggaggtgcagatcttctgt
tatgagtcagacctgtacccgtctatagacgacgcggtgaaggatggagggaggatcgca
gcgctggccgtcctgtttgagaccagcctggataacaatgacaactacaacaccatcata
gaaggcgtcaacagcgtcagcaggtttggtaagactgagaatgttgagcccttctctctg
ctggccctgcttcctaactctactgataaatactacatgtacaacggttcccttacctcc
ccaccctgctctgagacggtggagtggatcgtcttcaaaaacaccgtgcccatctctgag
acacagttggaggtgttctgtgaggtgatgaccatgcagcaggcaggctatgtgatgctg
atggactacttgcagaacaacttcagggagcagcagcagctgttcttgggccaggtcttc
tcctcctacactggaacagaggaggtcctcactcccatgtgcagctcggcgcctcagaac
atgcaggcggatgcccagaacgacactaccgtcatggtgatgtgggagcgcccccgtgtg
gtgtatgacaccaccatcgactggtactctgtcacctaccagcggctgcaggaccagaac
cagcccaaacacgagtaccgcaccgacggagaccaagacgtgggggccatcatccccggt
ctcctgtccaacagcagctatgtggtccaggtggtagctgtctgcaccaatggcctgacg
ggacgctggagtgaccagattatagtggacatgcctcaggagtacccggcgattgagtct
gatccaggcaatacagaacctgaggatatattggaaccagtggatatattggaacaagta
gaccagaacccagtagaagagagcagaaccagagaggatcgccagcagattttccctgac
cagccctccaccactgctgcctcccaagtgagctctgtgcctgtaccaccagggaccaga
gatgaccagaaccggatcgaccagaaccctgtgaaccagtccaggatggacaagcccaag
aaggaccagaccaggaaggacaagaagaagcagcgtatccctccccaccgccccttcacc
agggccgcctccaacggcaaaagcgccacctgggtcaccatggtgaccgaccagccgggc
tttctgattcccgtctcccggatgaccagcccgccacctgtccgccggcaaatcacagag
gaggcctcattgtcgtggtcgcctcagcagatccggaaccaaaaccgtggttccgctgcc
cagaaacctgacgtttccggtatcggcctgctacccccagagagcgatatgtacacccct
ccgggggggggcatggtggtcactgatgtttactacgaggacgttgtcaacagcactgct
ttagagttcacgactatgccatctaaaacaacactgaacaaaacactggattatagagtt
ctcagtcctgttactgccagacctaaagtcacaatgaaaggagaggacaggggcttggtt
ttgacctccaggcggtctgataacagagttagtacagtgacaagggccacccctattcaa
cagaccccggtttctgtaacctcaactccctctgtgccctggatcagacccaggacttca
agtcccagcaactccctctcaccggcctatggctcctccactacctcaggcctcgtcaag
gtcttacagctcaccacccagcccatattcaccgagatcagtaacagcagccatgagtca
agggtacaaatggtgggaagtgttgctgagagggagaagaggacagtggtccctctggct
gtggtatccaccctcaccattatctgtctcctggtcctggtgggcatcctcatctactgg
agaaactgcttccagacggttgacttcttcaccgaagacaccgcctcacccaaagtcatc
tctgctttgtcttcacctctgctgcccgccacagaagagcacgaggcgctgtcagtgaag
cagtttgtgaagcacgtggcagagctccaccagaccaacaccttctccaaggattttgag
attgtgacagagtgttatgaggaggtgcagtcgtgcacagtggagatgggcatcactact
gacagctccaaccacccagacaacaagaacaagaaccgatacatcaacatcatggcctat
gaccacagcagagtcaaactgctggaagagggagaaggtggagactacatcaatgctaac
tttgttgatggttttgagcgtacaagggcctacatcgcagcccagggccccctgaagtct
ggaacagaggacttctggaggatggtgtggcaggagaatgttggagtcatcgtcatgatc
accaacctgttggagaagggccggaggaagtgtgaccagtactggccaatggagaaccag
gaggagtacggttatttcctggtgaccctaaaagacaccaagaccctggcctactatacc
cggagaacctttaccgtcagagacacctcacaaaaggcttcccagaggggacgctgtgct
gagaggacggtggtccagtaccactacacccagtggcctgacatgggcgtgcctgaatac
accctgcctgtcatctccttcgtacgggcctcgtcccaggccaggactcaggacatgggc
cctgtccttgtacactgcagtgctggtgtggggaggacaggaacctacatcgtgctggac
agtatgctgcaacagatccaggaccagggaacggtcaacatactgggcttcctcaaacac
gtcagaacacagaggaactacctggtacagacggaggagcagtatgtgtttatccacgat
gccctggtggaggccatcatcagcagggacactctggtgacctctgacctggtccactcc
tacgtcacggacctgctgaccactgggccctccgggaggacccgcatggagagacagttt
aagctggtgagtcagcgcagagccagacaggctgactacgccgctgccctgagagaggga
aacgctgacaaaaacaggacctcctctctcatgccggtggagagatccagagtgtgtctg
tcatgtccagtggaaggagaatcttcagactacatcaacgcttcctatatcatgggttac
cacaagagcagggagtttatcctgacccagtgtcctctcccctccactgtctcggacttc
tggagaatggtctgggaccacaactcacagctcatcatctccctgcctgacacacacaca
gcacagagtgagggggaggagtcttgtgtctactggcccagtaaggatcagccaatcagc
tgtgagggtttcatagtgtcgttcactggagaggaccacatgtgtctggccaacgaggag
agactggtggtccacgacttcttactggaggccacacaggataactatgtcctggaggtg
cgtcagtacatgtccccctgctggcccaacccagaaagccccgtcagcagcaccttccag
ctgctcaacattatcacagaggacagcagacggagagaaggaaccatagtcgtgcatgac
cggctgggtggctcgatggcggggctgttctgtgccctcaccaccctggcacagcagctg
gagcagcagggctctgtggatgtgtaccaggtggcacggatgactaacctcatgaggccc
ggtgtcttcaacgacatggagcagtaccagttcatgtacagggccgtgttgagtctggtg
gacagccaggaagaccagagggccctacagtcccctgagaccaacggttctgtccctctg
ggggccaccactgcagcagagagcctggagtccctcatgtaa
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