Oncorhynchus tshawytscha (Chinook salmon): 112217203
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Entry
112217203 CDS
T05605
Name
(RefSeq) liprin-alpha-2-like isoform X1
KO
K26226
liprin-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112217203
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112217203
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
112217203
NCBI-ProteinID:
XP_042156311
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Position
LG17:complement(20284454..20562662)
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AA seq
1318 aa
AA seq
DB search
MMCEVMPTISEDTAQRGSQSSASDPDSHFEQLMVNMLDERDRLLDTLRETQESLGMSQQH
LEDVIYDRDSLQRQLSSALPQEFAALTKELNVCRENLLEKEEEISELKAERNNTRLLLEH
LECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLE
RVSALEEELTSANQEIVALREQNAHIQRKVASGDGSEDMLEGTDASQKVHSKRLSNGSME
SAHEAGQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELDTARKDLIKTEEMSTKY
QRDIKEVRREAMCQKEDMEERIVTLEKRYLSAQRESTSLHDISDKLENELANKEAFLRQM
EDKNRQLLERLEIAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRHLE
GQLEEKHQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLI
QDSEGYRKQYEDSIHEKTHLADEIDKLRSELDQFRLRTGSLTEPTLSRYGSHLDTSGELR
FSLGSLAETQSDHYRSAKVIRRPRRGRMGLHRDESKAKSLGEHEWRSQQLGILGSHPFES
EMSDMSDIDDDDRETMFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTE
LRAEEIENRVASVSLEGLNLARMHHPGASITASATASSLASSSPPSGHSTPKLDHRSTAD
MERMGIMTLPSDLRKHRRKIAATDDDGQDKATIKCETSPPPTPRTVRMTRTLPASSHNEA
RGIAASLEAEASGLSSVASSQDSINKQPKKKGIKSSIGRLFGKKEKTRLAQLHAHREAIG
QSQGVSDPDLGQDMAVGKLGTQAEKDRRLKKKSGHELLEEARRKGLPFAQWDGPTVVAWL
ELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPPTSRTPSGNVWVTHEEMETLAAPSSKTRSGESEEGSWAQTLAYGDMNHEWIGNEWLP
SLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDRKE
LERRREHSQHEMRDVLVWSNERVIRWVQSIGLKDYANILLESGVHGALVALDDNFDHTSL
ALLIQIPNQSTQARQILEREYNNLLALGTERRLDEYEDNDLRGPSWRRQFPPRDVHGISM
MPGSAETLPAGFRVTTGSHSRRLPPEVLYEALDDSPDDMYLDWFQGQIYWSDTMWPAVGL
CAFTPPKTPRFLLSTLPYLLSSPTVFSLYLYCSVPPFRSAPDANYKGGHLFVQVVRLL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggctcagcggggctctcagagc
agtgcctcggacccagactcccactttgagcagctgatggtcaacatgctggatgagagg
gaccgcctgttggacacgctgagggagacccaggagagcctggggatgtcccagcagcac
ctggaggacgttatctacgaccgggactcactgcagcgccagctcagctccgccctgcca
caggagtttgcagctctgaccaaggagctgaatgtgtgcagagagaaccttctggagaag
gaggaggagatttctgagctcaaggccgagaggaacaacaccaggttgcttctggagcat
ctggagtgcctggtgtccaggcatgagcggtcactacgtatgactgtggtcaagcggcag
gcccagtccccctcaggcgtgtccagtgaggtggaggtcctcaaagcgctcaagtccctg
ttcgagcaccacaaagctctagacgagaaggtgagggagagactgcgggtgtcgctagag
agggtctctgcattggaggaggagctaacatcagccaaccaggagattgtggccttacgg
gagcagaatgcccacatccagaggaaggtggcgtcaggggacgggtcagaggacatgctg
gagggcactgatgccagccagaaggtacatagcaagcgcctgtccaacggctccatggag
tcggcccatgaggcgggccaggtggtggagctgcaggacctgctggagaagcagaactat
gagctggcgcagatgaaggagcgcatgtcttccctgtcgtcccgcgtctccgaggtggag
caggagctggacaccgcgcgcaaggacctcatcaagacagaggagatgagtaccaagtac
cagagggacatcaaagaggtgaggagagaggctatgtgtcagaaggaggacatggaagag
aggatcgtcactctggagaagcggtacctcagcgcccagagagagtccacctccctgcat
gacatcagtgacaaactggagaatgagctggccaataaggaagccttcctcagacagatg
gaggataagaacaggcagctgctggagcgtttggagatagcagagcagaagctgcagcag
accatgagaaaggctgagaccctgccagaggtggaggctgaactggcccagaggatagca
gcactcaccaaggcggaggagcgccacggcagcatcgaggaacgcatgaggcacctggag
ggccagctggaggagaagcaccaggagctgctcagagctcggcagagagaaaagatgaac
gaggaacacaacaagcgcctgtcggacacggtggacagacttctcacagagtccaacgaa
cgtcttcagctccacctgaaagagaggatggctgctctggaagagaagaacgttttaata
caagactcggaaggctacagaaaacagtacgaggattcaatccatgaaaaaactcatctg
gcagatgagatagacaagctgagatcagagttggaccagttccgactgagaacaggctca
ctcacagaacccactctgtcacggtatgggtctcacctggacacgtcgggggagctccgc
ttctccctgggctccctggctgagacccagtcagaccactaccggtcagccaaggtcatc
cgcaggcccaggagaggacgcatgggtctccacagggacgagagcaaggctaagtcactg
ggggagcacgagtggcgctctcagcagctaggcatcctgggtagccacccgtttgagagt
gagatgtctgacatgtcggacattgatgacgatgaccgggaaaccatgttcagctccatg
gacctgctgtcccccggcggtcactcagacgcccagaccctagccatgatgctgcaggag
cagctggacgccattaacaaagagatacgactgatccaggaggagaaggagtcgacagag
ctgcgggcggaggagatagagaaccgtgtggccagcgtcagcctggagggtctcaacctc
gcccgtatgcaccaccccggagcctccatcaccgcctcggccaccgcctcctccctggcc
tcttcctcccctcccagcggacactccacccccaagttggaccaccgcagcaccgcagac
atggagcgcatgggtatcatgacactgcccagtgatctgaggaaacacaggagaaagatt
gcggccaccgacgatgacggccaggacaaggctaccatcaagtgtgagacgtcccctcct
cccacgcctcggaccgtacgcatgacccgcacactgccagcctcctcacacaacgaggcc
cgaggcattgctgccagcctggaggcagaggccagtggtctgagcagcgtagccagcagt
caggactccatcaacaagcagcccaagaagaaaggcatcaagtcctccatcggacgcctg
tttggcaagaaggagaagaccagactggcacagctgcatgcccacagggaggccatcggg
cagagccaaggagtgtctgatccagacctgggtcaggacatggctgtggggaagctgggg
actcaggctgagaaagaccgccggctgaaaaagaaaagcgggcacgagttgttggaagag
gcgaggaggaaaggcttacctttcgcccaatgggacggccccacagtggtggcctggctg
gagctgtggctggggatgcccgcctggtacgtggcggcgtgtcgtgccaacgtgaagagc
ggtgccatcatgtcggccctgtcggacacagagatccagagggagattggcatcagtaac
cccctgcaccgcctcaaactacggctggccatccaggagatggtgtccctcaccagtcca
tctgccccgccaacctccagaaccccgtcaggcaatgtatgggtgacccacgaggaaatg
gagaccctcgcagcaccctcctccaaaacgaggtccggggagtccgaggaggggagctgg
gcgcagactctagcgtatggtgacatgaaccatgagtggatagggaacgagtggttgccc
agtctaggactacctcagtaccgcagctacttcatggagtgcctggtggacgcccgcatg
ctggaccacctcaccaagaaggacctccgggtgcatctcaaaatggtggacagctttcac
aggacgagtttgcagtatggtatcatgggtctgaagaagctcaactatgacaggaaagag
ctggagagacgcagagagcacagccagcatgaaatgagagacgtgctggtgtggagcaac
gagcgggtgattcgctgggtccagagcatcggcctaaaagactatgccaacatcctgctg
gagagcggcgtgcacggggccctggtcgccctcgacgacaactttgaccacaccagcttg
gcgctgctcatccagatccccaaccaaagcactcaggcacgtcagattctggagagggaa
tataataacctgctagccctgggcactgagagacgactggacgagtatgaagataatgac
ctccgggggccatcgtggaggaggcagttccccccgcgggacgtccatgggattagtatg
atgcccggttcggcagagaccctccccgctggcttccgtgtcaccaccggctcacactcc
cgtaggctaccccccgaagtgctctatgaggcgctggatgacagtcctgacgacatgtat
ttggactggtttcaaggtcagatatactggagcgataccatgtggcctgctgttggcctg
tgtgcctttacgccccccaaaactccccggttcctgctgtccaccctaccgtacctcctc
tcttctccaactgtcttctctctctacctctactgctctgttcctccgtttcgttctgct
cctgatgccaactacaagggtggccatttgtttgtccaggttgtccgtttgttatag
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