KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112217354
Entry
112217354         CDS       T05605                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137  Mitophagy - animal
otw04140  Autophagy - animal
otw04144  Endocytosis
otw04145  Phagosome
otw04148  Efferocytosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112217354
   04145 Phagosome
    112217354
   04140 Autophagy - animal
    112217354
   04137 Mitophagy - animal
    112217354
   04148 Efferocytosis
    112217354
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112217354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112217354
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112217354
   04031 GTP-binding proteins [BR:otw04031]
    112217354
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112217354
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112217354
  Exosomal proteins of other body fluids (saliva and urine)
   112217354
  Exosomal proteins of colorectal cancer cells
   112217354
  Exosomal proteins of bladder cancer cells
   112217354
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112217354
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 AAA_16 Septin AAA_22 AAA_7 NTPase_1 AAA_24 AAA_5 ATPase_2 ABC_tran NACHT
Other DBs
NCBI-GeneID: 112217354
NCBI-ProteinID: XP_024233357
LinkDB
Position
LG02:33805732..33820692
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKTSAEACTC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatccaggaagaaagtgctcctgaaagtcatcatcctgggggattctggagttggg
aagacctctctgatgaaccagtatgtgaataggaagttcagtaaccagtacaaagctaca
ataggagctgacttcctgaccaaggaggtgatggtggacgatcggctcgtcacaatgcag
atctgggacacggcagggcaagagaggttccagtctctgggtgtggcgttctaccgtggg
gcagactgttgtgtgctggtgtttgacgtaactgcccccaacaccttcaagactctagac
agctggagggacgagttcctgatccaggccagtcccagagaccccgagaactttcccttt
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgaccaagcgggctcag
gcatggtgtcagagtaagaacaacatcccctactttgagactagtgccaaggaggccatc
aatgtagagcaggccttccagaccattgcacgcaatgccctcaaacaggaaactgaggtg
gagctgtataatgaattcccggagcccatcaagctagacaggaatgacagagcaaagact
tcagcagaggcctgcacctgctga

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