Oncorhynchus tshawytscha (Chinook salmon): 112217369
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Entry
112217369 CDS
T05605
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a
KO
K24720
tubby-related protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112217369 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Tubby family proteins
112217369 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
112217369
NCBI-ProteinID:
XP_042156440
LinkDB
All DBs
Position
LG18:23134141..23189618
Genome browser
AA seq
1781 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKPLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAVL
PPDSSCLPPTRNAVVKFYNVCGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPVLYVVR
VEHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSPNVFSEDEDD
LPVTGASGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDVLSNPTA
ISSVASAGGSSDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGPPPSHHHQQQQQ
SHPQSHQQPLQQHHQQQQIQHQQQQQLQHHHQQLQQQQQRLAQQHHQQQLAQQHQQQIQQ
QQMLQHQQMQQQQIQQQQQHIQQQIQHMQQQQQHIQQQHQQQLQHQQQLQQQQQQHQQHH
QMQQQQQIQQHHQMQQQLQISVPSQVSGAAVHQLQQGALQIPVPHPAGGLVAERRVSVEH
EHLLKIKPTRSAPQLAEGDTVVFSAPLELSKMNPPPPYPGTVAAAAASASAAAANAASGQ
AGGSNGTPPPVDLCLKKGEFSLYPPGQQAAQYPTPLGYERITTFDSRGNVEEVCRPRTRL
VCNQNIYTLQVPGSSATLRVTSSSSSTDGKKIQLPYASATLNRLTVPRYSIPSGDPPPYP
DTANQNTTGGRSTGQRLDSSLIHATLRRNSREAALKVSQMLDPQRTLPTKAKSQNAALAA
SYQQRVPKALYTCSQCSSNSSGLSSAASSAPSGTANGIAGGTIIRQDFPPGNGAPHSTVI
VHSNSASPLVSQSSYNLDGSGNGGGGGNRDRADYVNSAFTEDEALSQSLRHLALGGADVS
GLTVKRPPPYQWDPATTEEVWVPQERTGTLSSAGPTGPHKPPPLILSPAQHLDISRLPFI
LSPKSPTSPSAASFQAAAAAAGYQISLQYAPGTTYSGPQQQPMPGSPRLCSPKEVVAPVP
FNQQDATLVLPPGYPANLSNLACCPLPPMYPGGSSCAGLPIPPIALHTPWGTYNPCPPMP
SPSGTLPPIPLSPSSPTASPPPPPAELQLQGHGGSPEAMAMDAGEGFHEVLSLNESPVPS
SAEKFGKKNRKRADGRAEEANAPAIAEGGKSKKEGRALGDFNSLISSPRLGSREKKKPKG
QKEQQLKAKKLSKAPTNSEFQDSSESEPELFISGDELLNQCQSGKKGWKSKRSLRAASEL
EEIKCRKANEKEDRGLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELE
GRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggggttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtgctggtgcgatggaacgagccctttcagaaactggccacttgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgacggtacccaggct
ctcatctcttaccgtgatggctttgtcctggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtattgtttggtactgcggacggccaggtgatcgtgatggactgccacgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctggtggaggacagcagcgagagcgacacagactctgacgactacacaccacca
caagtccaacgtttgaagcctctgctgacggtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctctcccactcttatccacactggcctaaaagatgtggta
gtccagtggtgttctcagggggatctcctggccgtggctgggatggagagagctgtcttg
ccccccgactcctcctgtctacctcccaccagaaacgccgtcgtcaagttctacaacgtc
tgcggagaacacatctacacactggacacacctgcacaacgtcccatcaccaccctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggcccggtactctacgtggtgcgg
gtggagcaccgggtggccagcctgcagctgctgtgccagcagggcattgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttacgtcacc
acagccttcacacccaccatcaagccccccattccagaccccaacaatatgcgtgacttt
gtgagttacccgacggcggggaacgagcggctgcactgcaccatgaagcggacagaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctggggggcttggtg
cccatcctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggtcggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccagaatcaatattgacccc
agaaagtcccccaaactgtcccgcgctacccaggagatctcgcggtcgccacggttaccc
atccggaagccatccattgggtccccaagtctcacccgcagagagttccccttagatgac
atcacacagcataactaccttgctcaggttacatccaacatttggggaacaaagtttaag
attgtgggacttgccaccttcttgccaaccaatcttggtgcagtgatctacaagacaagt
ctgctccacctgcagcccagacagatgaccatctacctgccggaggtgcgtaagatctct
atggactacatcaacctgcctgtgttcagccccaacgtcttcagtgaggatgaggatgac
ctgccagtcaccggggcctcgggcgtggccgacgacaaccctccctgcactgtcaacatc
cccattgcccccatccacagtcccgcccaggccatgtcccccacccagagcatcggcctg
gtccagtccctcctagccaatcagaacgtccagctggacgtcctatccaatcccacggcc
atctcctctgtggcttctgcaggggggtcgtctgaccagggccaggacaccatcctgacc
gcccagtacacggttcccagcaggtactccagtcctggacaggtcatatttggagggctg
gagatgagccggcttctggttgggcctcctccctctcatcaccaccaacaacaacaacaa
agccatccacagagccatcaacaaccactgcagcaacatcatcagcaacaacaaattcag
catcaacaacaacagcagcttcagcatcaccatcaacagctacaacaacagcaacaacga
ctagcgcagcaacatcaccaacagcaactggcacagcaacatcaacagcagatccagcag
cagcagatgctgcaacaccaacagatgcagcagcagcagatccagcagcagcagcaacac
attcaacagcagatccagcacatgcagcaacagcagcagcacatccaacaacagcaccaa
caacagctccagcaccaacaacagctccagcagcaacaacaacagcatcagcagcaccat
cagatgcagcaacagcagcagatacaacagcaccatcagatgcagcaacagctccagatc
tctgtcccctctcaggtgtcaggtgcagcggtgcaccagctccaacagggtgcgctccag
atccctgtcccccaccctgcaggggggctggtggctgagagaagggtcagcgtggaacat
gagcacctgctgaagatcaaacccacccgctctgccccccagctggctgagggggacacg
gtggtgttcagcgcccctctggagctcagcaagatgaaccccccgcccccctaccctggg
acggtggccgcagctgcagcctctgcctctgctgcagcagccaacgccgcctctggacag
gctgggggcagtaacggcaccccgccgccagtggacctgtgcctgaagaagggagagttc
tccctgtatcctcctggccagcaggcggcacagtacccaacgccgctaggctacgagcgg
ataactacgttcgacagcaggggtaacgtggaagaggtgtgccggcctcgaacgcggctt
gtctgcaaccagaacatttacacgctccaggtcccgggaagctcagcaaccctccgggtt
acctcctcttcttcctcaacagacgggaagaaaatccagctgccctacgcctcggcaacc
ctcaacaggctcaccgttccccgctattccatacccagtggagatccgcccccctacccc
gacacagccaatcagaacaccacaggggggaggagcaccggacagaggctggacagcagt
ctgatccatgccacactcaggcggaacagccgagaggccgctctcaaagtttcccagatg
ctggaccctcagaggaccctgcccactaaagccaaatcccaaaacgctgcactggcggct
tcctaccaacaaagggtgcccaaagccctgtacacctgcagtcagtgcagtagtaacagc
agtgggcttagcagtgcagccagcagtgctcccagtgggactgcgaatggaatcgcaggt
ggtacaatcattagacaggattttcctccagggaatggagctcctcacagcacggtgatc
gtccactccaacagcgcttctcccctagtctctcaatcctcatacaacctggatggctct
gggaatggaggaggaggtgggaacagagacagggctgactatgtgaactcagccttcaca
gaggatgaagcactgagtcagtcattgaggcatctggcactagggggtgcagatgtgtct
ggattgacagtcaagaggccaccgccataccagtgggacccagccaccactgaggaggtg
tgggtgccccaggaaaggaccggtactctgagctctgctggccccaccggaccccacaaa
ccacccccgctcatcctcagcccagcccagcacctcgacatctcccggcttcctttcatc
ctctcccccaagtcccccaccagccccagtgctgcctctttccaggctgccgctgcagct
gcaggttaccagatctcccttcagtatgctcctggcacaacctacagtggtccccagcag
cagcccatgccaggctctccccgtctctgctcccctaaggaggtggtggcccctgtccct
ttcaaccagcaggatgccaccctggtcctcccacctggctatccagccaacctgtctaac
ctggcctgctgccccctccctccaatgtacccggggggaagctcctgtgccgggctcccc
atcccccccattgccctacacaccccctggggcacctacaacccctgcccccccatgccc
agcccctcggggacactgccccccattcctctctccccctcctcccccaccgcctcccct
ccaccgcccccagcagagctgcagctgcagggtcatggtggctcaccagaggccatggca
atggatgccggagagggcttccacgaggtcctctccctcaacgagagccccgtgcccagc
agtgctgagaagtttggcaagaagaaccgcaagcgggcagatggcagggctgaggaggcc
aatgcaccggccatcgccgagggaggcaaatccaagaaggagggccgggccctgggtgac
ttcaactctctgatctccagcccgcggctgggcagcagggaaaagaaaaagcccaaaggc
cagaaggagcagcagctgaaagctaagaagctgagcaaggctcccacaaacagcgagttc
caggacagctcagagagtgaacctgagctcttcatcagcggggacgagctgctcaaccag
tgccagagcggcaagaagggctggaagagcaagaggagcctacgggcggccagcgagcta
gaggagatcaagtgccgcaaggccaatgagaaggaggaccgcgggttgggaagccagggc
tttgtttatgtgatggccaacaagcagccactgtggaatgaggccactcaggtctaccag
ctggactttgggggacgtgtcacacaggagtcagccaaaaacttccagatcgaactggag
gggagacaggtgatgcagtttggcaggattgacggcaacgcctacatcctggacttccag
tacccgttctctgctgttcaagccttcgcagtggctctagctaatgttactcaacgcctc
aaatga
DBGET
integrated database retrieval system
