Oncorhynchus tshawytscha (Chinook salmon): 112217375
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Entry
112217375 CDS
T05605
Name
(RefSeq) nesprin-1-like
KO
K19326
nesprin-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112217375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112217375
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
112217375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
DUF4939
Methyltransf_19
Motif
Other DBs
NCBI-GeneID:
112217375
NCBI-ProteinID:
XP_042156441
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All DBs
Position
LG18:23266224..23295061
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AA seq
1247 aa
AA seq
DB search
MTDLFEDIKDGVMLLALLEVLSGQKLPCEQGRKLRRIHWVSNIGTALNFLEGRKSAYRGS
PIKLVNINSTDIVDGRPSIVLGLIWTIILYFQIEELTSNLPALQALSSSTSSVDSSDTTS
PPVKRRPLPPLQGGARKALLRWVQQTATKHLGTDMKDFGPSWRTGVAFFAVILSLRPHLV
DMERVRRRANRENLQEAFSLAETELGIPQLLDPEDVDVDKPDEKSIMTYVAQFLKHHPNP
GHQQNSDSDSQPEEEVQSVEVLVSSFRIFRKEQRKGLRELKTWLDQLELDTARTQETKGN
LSQQYQSFKSVRVQLEMNRKQVEAAVLSTQKDGMLTVDQALVKQAWDRVSNRLLGWHMQL
DRALPAPLGVVGEWLHQAEGALRQEVTIQQTSDATSNTVHMTLEQHKDMLKVLEGHQQVF
QRIHKDRSVNGVPVPPEQLQDMAERMNFVSTSSNIHLAKMEFWENKHHMQAFLMLAESKL
KSWIIKYGRRESVELMLQNYVSFVEGQQFFEQYETLFQTLKQSSELYVKADGTVDEGEAG
VRRFMREVLTQWRSLSVEVRSVRSMLDEVLSNWERYSCTVASLQAWLEDAEGALSQPENI
KREFFRNLSQWMDQHSVMNDAGNFLIETCDETVSRDLKQQLLLLNGRWRDLFVKVKQYAR
EDELDKCRRDHMRAISALRELLDGAELKLNAPVQVSFLNIRSFLQDVENTKKKVVAMETQ
YKLAACSAQLLSKDAPQEEGAKAMATMTTFKGQLSKVRERCPSLVRECHGLLPLLEEMEK
HITGFYQALERAIRITAAGRDPKPQAQVQGQHKHKWQDLLSQQQSCKMCLSVIERNLHSL
QRMLSSSKALRNFDQTLLQKRVAEIQTSAQGLLKEVGEWRRQEEANSTMRRRFEESRQEL
ERVLKVATTCLREGGNAEELLRKQSEFFGQLDQRVLSVFLKACDDLTDILPEEEQKALQD
TVRTLHKQWKDIQMEAPFHLQRLKVEAERGRAGAVLQECRAELAREIQALTTTGSETVIR
EHRAFFREKAPLSVCEKSIGNMEELCQTLPDNDSARQTLDSTRRALADVKGQIEATHLKL
QQHSQWREWNDRFSELSDWLLSQRSQVRLLRERARDRSHQEQVDTTVQELQRAAEGQEES
LSWLNSRLAVLTEVSPEVEAIRQRAALAKLSSDLTALLSSLLEWGQEGSVRVHSEELRED
VRCALEEVLRARREAQEQTSRILEAENPEEARQLLLIHQVGAEGEVG
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgacggacctgtttgaggacatcaaggatggggtgatgctgctggccctgctggaggtc
ctgtctggacagaagttgccatgtgagcaggggaggaagctgcggaggatccactgggtc
tccaacatcggcacggcgctcaacttcctggagggcagaaagtctgcgtacaggggatca
ccgatcaagctagtcaacatcaactcgactgacatcgtcgatggaagaccatctatcgta
ctggggttgatttggacaataatcctctatttccagatagaggagttgaccagtaacctg
ccagcgctccaggccctctctagcagcacctcctcagtggacagctccgacaccaccagc
ccgcctgtcaagaggaggcccctccccccgctgcagggtggggccaggaaggccctactc
agatgggtccagcagaccgccaccaagcatctggggaccgacatgaaagactttgggccg
agctggcgtacaggtgtggcattcttcgcagtgatcctctctcttcgaccccacctggtc
gacatggagcgtgtgcggaggagagccaatcgagagaacctgcaggaagccttctcattg
gccgagactgagctgggcattccacagctactggacccagaagatgtggatgttgacaaa
ccggatgagaagtccatcatgacgtacgtggcccagtttctgaagcaccaccccaaccct
ggtcaccagcagaacagtgactcggactcccagccagaggaagaggttcagtctgtagaa
gtattagtgtcctcattccgtatcttcagaaaagagcagcgcaagggcctgagggagctg
aagacctggctggatcagctggagctagacacagcacgtactcaggagaccaagggcaac
ctcagccagcagtatcagtcctttaagagtgtacgtgttcaattggagatgaataggaag
caggtggaggcagcggtcctgtccacgcagaaggatgggatgttgaccgtggaccaggct
ctggttaaacaggcctgggacagagtgtccaacaggctcctagggtggcacatgcagctg
gacagggctctgcccgcccccctgggtgtggtgggggagtggctgcaccaggctgagggg
gcactccgacaggaggtcactattcaacagacatctgacgcgacatctaacactgtccac
atgaccctggagcaacacaaggacatgctcaaagttcttgaaggtcaccagcaggtcttc
cagaggatccataaagacagaagtgtcaacggagttcctgtccccccagagcagctgcag
gacatggcagagagaatgaactttgtatcgacttcgtcaaacattcatctggccaagatg
gagttctgggagaataaacaccacatgcaggcgttcctgatgctggcagagtccaagctc
aaatcctggatcatcaaatatggccgacgagaatcagtggagttaatgttacagaactat
gtttcatttgttgaaggacagcagttctttgagcagtacgagacattgttccagactctg
aaacagtcttctgagctctatgtcaaggctgatggcacagtggatgaaggcgaggcgggg
gttaggaggttcatgcgggaggtgttgacccagtggaggagtctgtctgtggaggtgcgc
agtgtaaggagcatgctggatgaggtgctctctaactgggagaggtacagctgcactgtg
gcctctctacaggcctggcttgaggatgcagagggagcactcagccagcctgaaaacatc
aaacgggagttcttccgcaacctttctcagtggatggatcagcactctgtgatgaacgac
gcagggaacttcttgattgagacatgtgacgagactgtgtcacgtgacctgaaacagcag
cttctcctgctcaacgggaggtggagggacctgttcgtcaaagtcaaacagtacgcccgt
gaagacgagctggacaagtgtaggagggaccacatgagggccatctctgccctgagggag
ctgctagacggtgcagagttgaagctcaacgcccctgtacaggtctccttcctcaacatc
aggtctttcctacaggatgtggagaacaccaagaaaaaggttgttgccatggagactcag
tacaagttggctgcctgcagtgcccagcttctgtccaaggatgccccgcaggaggagggg
gccaaggccatggctactatgacaacgttcaaaggtcaactcagtaaggtgagggagagg
tgcccttctctggtgagggagtgccatggactgctccccctgctggaggaaatggagaag
cacatcacaggcttctaccaggctctggagagggccatccggatcactgcagcaggcaga
gacccaaagccacaggcccaggtccagggacaacacaaacacaagtggcaggacctcctg
agccagcagcagagctgtaagatgtgtttatctgtgattgagaggaacctccactccctg
cagaggatgctctcctccagcaaggccctgaggaacttcgaccagaccctcctgcagaag
agagtggccgagattcagacctctgcacaaggtctgttgaaggaggtgggggagtggagg
aggcaggaggaggccaacagcaccatgaggaggaggtttgaggagtctcgtcaggagctg
gagagagtgctgaaggtggcaaccacatgcctgagagaggggggaaacgcagaggagctg
ctgagaaaacaaagcgagttctttgggcagctagaccagcgggtcctgagtgtgttctta
aaggcctgtgatgatctgacagacatcctgcctgaggaggagcagaaggcgctgcaggac
actgtcaggacgctgcacaaacagtggaaggacatccagatggaggcgccgtttcacctg
cagcgtctgaaggtggaggcagagcgaggacgggcaggggccgtcctacaggagtgcagg
gcggagctggccagagagatccaagcactgaccaccacaggcagcgagacagtcatcaga
gaacacagggccttcttcagggagaaagcacctctcagtgtgtgtgagaagagcataggc
aacatggaggagctctgtcagacactccctgacaacgactcggctagacaaaccctggac
tccaccaggagggccctggcagacgtcaaaggtcagatagaggccacccacctgaagctg
cagcagcactcccagtggagggagtggaatgacaggttctcagagctctctgattggctg
ttgtctcagagaagccaggtgaggctcctgagggagagagccagagatcgctcccaccag
gaacaggtggatactactgtccaggagctccagagggcagccgaggggcaggaggagagc
ctgtcctggctgaatagtcgtctggctgtactgacagaggtcagtcctgaggtggaggct
attagacagagggctgccctggccaaactctcctctgacctcaccgccctcctctcctct
ctcttggagtggggtcaggaggggtctgtgagggtccacagtgaggagctgagggaggat
gtgcgttgtgctctggaggaggttctcagggctcggagggaggctcaggagcagaccagc
aggatcctggaggcagagaacccagaggaggccaggcagctgctcctcatacaccaggta
ggggctgagggagaggtgggctga
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