Oncorhynchus tshawytscha (Chinook salmon): 112217377
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Entry
112217377 CDS
T05605
Name
(RefSeq) solute carrier family 22 member 6 isoform X1
KO
K08212
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112217377
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
112217377
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
112217377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
112217377
NCBI-ProteinID:
XP_042156797
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All DBs
Position
LG18:complement(25268327..25290691)
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AA seq
993 aa
AA seq
DB search
MQNPLHTGARGARNTCQGIMSVDRLFDELGHFKRFQACLYFAAVFQAIACGIHYLASVFL
VERPSFVCAPPGNVTDVLYGNYTGASLEEVLPFFKPANGPMVVRTAEGKQWELSTCQRTQ
RMNPTDFTYEQLVNRTTEKCDSNYHYVYDHSEVYQSIVTDWDLVCDREWLAKLCQPTFMM
GVLVGALVFGDIADRVGRRRILMITSLCQFVFGVSVAFTGNYYLFMFIRFLLAMVSSGYL
VVVFVYVTEFTGNKVRTWTSMHVHAAFAVGVMMVAVMGYLVRTWRSYQILLSTCTSPFLF
FCWKFPETPFYLMAKGRLQETQVLLDSIARFNGLEPGRLKAEDLLEPEEALLEKEVAAGV
AQPAEPEKKLSILDLFGTWRMGWRTVTVGAVWFISSLGYYVFSLGSVNLGGNQYINLFLA
GAVEFPSYLIGCYAMDRVGRKRTCAPALLLAGMACMLIIVVPNDIEVLAIFLSMTGKFAI
AIAFGLIYLYTCELYPTIIRYSKHCELYPTIIRYSKHCELYPTIIRYSKHTVSSTQPSSG
TVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSST
QQSSGTVNTVSSTQPSSGTVNTVSSTQQSSGTVNTVSSTQQSSGTVNTVSSTQPSSGTVN
TVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPS
SGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVS
STQPSSGTVNTVSSTQQSSGTVNTVSSTQPSSGTVNTVSSTQQSSGTVNTVSSTQQSSGT
VNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQ
PSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNTVSSTQPSSGTVNT
VSSTQPSSGTVNTVSSTQPSSSTVNTVSSTQQS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccgctacacactggagcgagaggcgcgcgaaatacctgtcaaggaattatg
agcgtggatcgtctattcgatgagcttggacacttcaaaaggttccaggcatgtctgtac
tttgctgctgtcttccaggccatagcctgtggaatccactacctggcctctgtgttcctt
gtggagaggccaagctttgtctgtgccccgcccggtaacgtaactgacgtcctgtatggg
aactacacaggtgcttccctggaggaggtgctaccgttctttaaaccggcgaatgggccc
atggtggtgcggacggcggagggcaaacagtgggagctcagcacctgccagcgaacccag
aggatgaaccccacagactttacctacgagcagctcgtcaacaggacgacagagaagtgt
gacagcaactaccattacgtgtatgaccacagcgaggtgtatcagagcatcgtgacagac
tgggacctagtgtgtgacagggaatggctggccaagctgtgtcagcccacttttatgatg
ggtgtgctggtcggagcgctggtgttcggggacatcgctgatagggttggcagacggagg
atcctgatgatcaccagcctgtgccagtttgtgtttggtgtaagcgtggcatttacgggg
aactactacctatttatgttcatacgcttcctgctcgccatggtgtctagtggctacctt
gtggtggtgtttgtgtacgtgaccgagttcaccggcaacaaggtgcgcacgtggacctcc
atgcacgtgcacgccgccttcgccgtgggcgtcatgatggtagcagtcatgggctacctg
gtgcggacctggcggagctatcagatcctcctctccacctgcacctcccccttcctcttc
ttctgctggaagttcccagagacgcccttctacctgatggctaaggggaggctccaggag
acccaggtcttgttggactccattgcccgcttcaatgggctggagcctggccgcctgaag
gccgaggacctcctggaacccgaggaggctctgctggagaaggaggtggcagcgggggta
gcccagccagcagagcccgagaagaagctgagcatcctggacctgtttgggacatggagg
atggggtggaggacagtgacggtgggggccgtgtggttcatcagcagcctgggctactat
gtcttctccctgggctctgttaacctggggggcaaccagtacatcaacctcttcctggct
ggtgcggtggagttcccctcctacctgattggctgttatgcgatggaccgggtgggcagg
aagaggacatgtgccccggctctgctgctggcaggaatggcctgcatgctcatcattgtg
gtgccaaacgacatcgaggtgttagccatcttcctcagtatgacagggaagtttgctatt
gccatcgcctttggcctcatctacttgtacacctgtgagctctacccaaccatcatcagg
tacagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctc
tacccaaccatcatcaggtacagtaaacacactgtgagctctacccaaccatcatcaggt
acagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctct
acccaaccatcatcaggtacagtaaacactgtgagctccacccaaccatcatcaggtaca
gtaaacactgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctctacc
caacaatcatcaggtacagtaaacactgtgagctctacccaaccatcatcaggtacagta
aacactgtgagctctacccaacaatcatcaggtacagtaaacactgtgagctccacccaa
caatcatcaggtacagtaaacactgtgagctccacccaaccatcatcaggtacagtaaac
actgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctccacccaacca
tcatcaggtacagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacact
gtgagctctacccaaccatcatcaggtacagtaaacactgtgagctctacccaaccatca
tcaggtacagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacactgtg
agctctacccaaccatcatcaggtacagtaaacactgtgagctctacccaaccatcatca
ggtacagtaaacactgtgagctccacccaaccatcatcaggtacagtaaacactgtgagc
tctacccaaccatcatcaggtacagtaaacactgtgagctctacccaacaatcatcaggt
acagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctct
acccaacaatcatcaggtacagtaaacactgtgagctccacccaacaatcatcaggtaca
gtaaacactgtgagctccacccaaccatcatcaggtacagtaaacactgtgagctctacc
caaccatcatcaggtacagtaaacactgtgagctctacccaaccatcatcaggtacagta
aacactgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctctacccaa
ccatcatcaggtacagtaaacactgtgagctccacccaaccatcatcaggtacagtaaac
actgtgagctctacccaaccatcatcaggtacagtaaacactgtgagctccacccaacca
tcatcaggtacagtaaacactgtgagctctacccaaccatcatcaggtacagtaaacact
gtgagctctacccaaccatcatcaggtacagtaaacactgtgagctctacccaaccatca
tcaagtacagtaaacactgtgagctccacccaacaatcataa
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