Oncorhynchus tshawytscha (Chinook salmon): 112217396
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Entry
112217396 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase eta isoform X3
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112217396
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112217396
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112217396
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112217396
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112217396
CD molecules [BR:
otw04090
]
Proteins
112217396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_PBP1
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Ig_ILCR1
Interfer-bind
PTP-SAK
fn3_SORL1
FN3_Tor_3rd
Tc-R-P
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DSPc
PhoD_N
Motif
Other DBs
NCBI-GeneID:
112217396
NCBI-ProteinID:
XP_024233614
LinkDB
All DBs
Position
LG01:11733673..11849688
Genome browser
AA seq
1525 aa
AA seq
DB search
MSRLSCFGVLLRASIVLYLFLKCSEAQCTPCTNFKGVVTHIDSTDQVDSNCSLSTGNASV
PSNLTTNVLNKNQNFNCCCTTKPEQPVDIVATRRGTSQLNVTWTLRNGSVEYYSVNIFNA
ALNYRSSNTTQTREASFTGLQPGRVYEVTVTAVAGDFRNQSARVQLATNPNPPGPLNITE
RTTSSLVVQWTIPGLMIGAQGISYNISYQLNGTGLGERNQSSSTTSLSSNLTSLSSGTCY
TITVKTMGPQNLESTSVYASECTLPKPVVNLTATPLSNSSCKLQWTDPVEVKNYYTYRVQ
YIKATGPVLKTVSTNFTQVNDLEPGTGYNFTVTSVAATGSEGTPERTFCNTKPNVVSNLT
FEGLNTTAIRLSWLKPNDHKPTYSYLVTISKNGSVVEISTMVEMYTFTNLTPGNCYNCSV
VTVVQDVKSDSTETIICTKPAVVKNLIAIGTTTNMSVTWYRPMGQVDNYTVTIYKNNVME
DNRTITNNYLSVVFQNLKPGKVYVVKVATNSGPLTEALNVTNATYPNPPGGIMVVDQTTG
SINISWARPLDMDLGQYSFSVFHLDRQNLTEHNWTLLKNLQSGTLYNISVVTVGPFDYQS
TVVTTAKSTRPQSVIRLIEAGITTTNVTLVWFQPESKPGYTFRVEVTNQSVTTNTTMKTI
TGVQSGSNYTTNITITGLQSGSNYTFTVTTLTGDGTMATPVTVSYFTRPFAVSGLVASTV
NTTTVNLTWTKPPQYQSGYTYRIQTEGCMSAPTNRTTETGEGDLISELTPGTRCTFSVSV
KALNSIEGESVSTSQYTKPESVNMFIYNNGSNSTIVVHWEAPRGNVEHYIVYLNKVLFSD
LLNSSIRSTSFLNLSAGRSYTAVVTTISGSFNASSEPGTTATYPNQPGPILILEKTTSSI
SVEWGEAPLMTNTTFSYLVTYLSTQLNNKTVTLTNTRHTLPSLSSGTPYNISVATVGVLG
LQSEKVWSSLVTTRPESVQSLSVVTAEENITLTWNKPVDHKPSYHYYVIWINSGLIISNT
TTLMEDLIIDQLVPGSLYNFTVTTETADGTKGAPVSNSICTNASPVFNLKCDSPNDPKVI
LSWTKPKGLNQGFQITAYETNQPPQDQAHYNTSGDCTPACGHTVSDLKHNTDYTLTVTTL
GCGSSSTIQTLTCKTGVNAVIGVAVGVTIGVFAILFIITIALVIHWRRQTKKDTSDIQIH
SMRAKVSVAVRVEDYEAYYKRQKADSNCGFAEEFEDLKPVGTAQAKTSAMAMENKSKNRY
NNVLPYESSRVKLSIHGSPFDDYINSNYIPGYNSRKEFIAAQGPLPVTVNEFWRMIWEKN
VQTLVMLTRCNEQGRVKCEKYWPSETKHFQNITVTTTSEIPLEDWTIRDFDVKNVRTAET
RSVRHFHFTAWPDHGVPETTELLINFRHLVREHMDQYSRHSPTVVHCSAGVGRTGTFIAI
DRLIFQIERDSMVDVYGTIHDLRMHRPLMVQTEDQYLFLNQCAIDIIRSRTGTNVDLIYQ
NTAALTIYENVEPRKDTAKNGYHNT
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactgtcgtgcttcggtgttcttctcagggcgtctattgtgctatatctgttt
ctcaaatgctcagaagctcaatgcactccctgtactaatttcaaaggtgttgtaacacac
atagacagtactgatcaggtagattccaactgcagcttgagcactggcaatgcatcagtt
ccctccaacttaactaccaatgtcctgaataaaaaccaaaacttcaactgctgctgcaca
acaaagcctgaacaacctgtggacattgtggctacgagacgaggaaccagtcagctgaat
gtgacatggaccttgcgtaacgggagtgtggaatactacagcgtgaacatatttaatgct
gctttgaactatagatccagcaataccacacagaccagggaggccagcttcactgggtta
cagcctgggagggtttatgaggtcacagtgactgctgtagctggagactttaggaaccag
tctgctcgggtccagttagccaccaatcccaacccacctggacccctcaacatcacagag
aggacaaccagctccctcgttgtccaatggacaatcccgggtctaatgattggagcgcaa
ggcatctcctataacatcagctaccagcttaatgggactggtttaggagagagaaaccag
tcttcctctaccactagtctcagcagtaacctgacctctctgtcctctggaacttgctac
accatcacagtgaaaaccatgggacctcagaatctagaaagcaccagtgtttatgcatca
gaatgtaccttacccaaaccagtggtgaacctcacagccaccccgttgtccaactcctca
tgtaagctacagtggactgaccccgtggaggttaagaactactacacctatagagtccag
tacataaaggctacaggccctgtactgaaaacagtcagtaccaacttcacacaagtcaat
gacctagaacctgggactggctacaacttcactgttacctcggtagcagcaacgggaagc
gaaggaactccagaacgcacattctgtaacactaagcccaacgtggtcagtaacctcaca
tttgagggtctgaacacaaccgctatcagactttcctggctcaagccaaatgaccacaaa
ccaacctactcctatctggtgaccatctccaagaatggttctgtggtagagatctcaacc
atggtcgagatgtacacgttcaccaatctcactcctgggaactgttataactgctctgtg
gtcacggtcgtccaggatgttaagtctgattcaacggagacgataatctgcacaaaacct
gcggtggtgaaaaacctcatcgccataggaacaacaaccaacatgagtgtaacctggtat
agacctatgggacaggtggacaactacaccgttactatctacaaaaacaatgtgatggaa
gacaaccgtaccatcaccaacaactatctatcagttgtgttccagaacctgaagccaggg
aaagtctatgttgtcaaagtggccactaatagtggaccactcactgaggcactaaatgtt
acaaatgcaacgtatcccaaccctcctggaggcatcatggtggtggaccagactactggt
tccatcaacatcagctgggcccgacccctggacatggacctaggtcagtacagcttctct
gtgttccatctggaccggcagaacctgacggaacacaactggaccctcctgaagaacctc
cagtctggaacactctacaacatctctgtggtaactgtagggccgtttgactaccagagc
acagtggtgacgacggccaagtctaccaggccccagtctgtgatcagactgattgaggca
ggaatcacaaccaccaatgtgactctagtctggtttcaaccagagagcaaaccaggctac
accttcagagtggaggtcaccaaccagtctgtcaccaccaacaccaccatgaaaaccatc
accggggtacagtctgggagcaactacaccaccaacatcaccatcactgggctacagtct
gggagcaactacacctttacagtgacaacactcacaggggacggcaccatggcaaccccg
gtgacggtgtcttattttacaagaccatttgccgttagtggtttggtagcctctacagta
aacacaaccactgtgaatctgacctggaccaaaccacctcagtaccagagtggttacaca
taccgtatccagactgaggggtgcatgtccgctcccacaaaccgcaccacggagacagga
gagggggacctcatctcagaactcacaccaggaaccagatgcaccttcagtgtttccgtc
aaggcactgaacagcatagagggagaatccgtctcaacctctcagtacacaaagcccgag
tctgtcaatatgttcatctacaacaatggtagcaacagtaccatagtggtgcactgggaa
gcgcccagaggaaacgtagagcattatatcgtctatctgaacaaggtccttttctcagat
ttgctgaactccagcattcggtcaacatccttccttaacctgtcagctggcagaagctac
acagccgtggtgaccactatcagtgggtccttcaacgcttcatcagaacctggaactaca
gcaacttatcccaaccagcctgggcccatcctgatcttggagaagaccactagttctatc
tctgtggagtggggtgaagctcctctgatgaccaacaccaccttcagttacctagtgacc
tacctttcaacgcaactaaataacaagacggtcactctgacaaacacaagacacacactg
cccagtctgtcctctggaacaccctacaatatctctgtggctacagtgggagtgctaggg
ctccagagtgagaaggtctggagcagtttggtcacgaccagaccagagagtgtccagtcc
ctcagtgtagtgacagcagaggagaacataacattgacctggaacaagcctgtggatcac
aaaccaagctaccactactatgtgatctggatcaactctgggttaatcatcagtaacaca
accacacttatggaagacctaatcatcgatcaattggttcctggtagtctgtataatttc
actgtgacaacagagacagctgatggaacaaagggagctccagtctcaaactccatctgc
accaatgccagccctgtgttcaacctgaagtgtgactctcctaatgaccccaaggtgatc
ctgtcctggaccaaacccaaaggtctgaaccagggcttccagatcactgcttatgaaacc
aaccaacccccccaggaccaggcacactataacactagtggtgactgtacaccagcctgt
ggccacacagtctctgaccttaagcacaatacagactacaccctgactgtaaccacactg
ggctgtgggagttccagcaccatccaaaccctcacctgcaagactggcgttaatgctgtc
atcggtgtggctgtcggggtaacgattggagtttttgccatcctcttcatcatcaccatt
gccttagttatccactggaggagacaaaccaagaaagacacttcagacatccagattcac
tccatgagagctaaagtaagcgtggccgtgagggtggaggactacgaggcttattacaag
aggcagaaagcagactccaactgtggtttcgccgaggagtttgaggacctgaagccagtg
ggaacagcccaagctaaaaccagtgctatggccatggagaacaagtctaagaaccgctac
aacaacgtgcttccctatgaatcctctagagtgaaactgtccatccatgggagtccattt
gacgactacatcaattctaactacatcccgggttacaactccaggaaggagtttattgcg
gcccaaggtccgttgcccgtcaccgtcaatgagttctggaggatgatctgggagaagaac
gtccagactctggtcatgctgacacgctgtaatgaacagggacgagtgaaatgtgagaaa
tactggccatctgagaccaagcactttcagaatatcacggtgacaacaacctctgagatc
cccctagaagactggaccatcagggattttgacgtaaaaaatgtgaggacagcagagaca
cgctcggtgcgtcacttccacttcacagcctggccggaccacggcgtccccgagaccacg
gagctgctcatcaacttcagacacctggtccgagagcacatggaccagtactcacgccac
tcccccaccgtcgtccactgcagtgcgggtgtgggtcgtacaggtaccttcatagccatc
gaccggctgatcttccagatagagagggacagtatggtggacgtgtacggcaccatccac
gacctgcgcatgcaccggcccctcatggttcagaccgaggaccagtatttgttcctaaac
cagtgtgccatagacataatccgatccagaactggaaccaacgtggacttaatctaccag
aacacggctgcactcaccatctatgagaacgtagaaccaaggaaagatacagctaagaat
ggctaccataacacatag
DBGET
integrated database retrieval system
