Oncorhynchus tshawytscha (Chinook salmon): 112217417
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Entry
112217417 CDS
T05605
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112217417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112217417
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112217417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
112217417
NCBI-ProteinID:
XP_024233455
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Position
LG18:complement(6868721..6898202)
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AA seq
613 aa
AA seq
DB search
MCTTSKDYTGAIEHLFMFLDAPELQNEAEDVNCWWEIKDTSCSSSRYRISSLRQYSQSSV
LPLPMTRNPYTMPTISAFCTEDNVSECISYINQEVSSLGFPLLCTESNNGPELNLVAVLN
NVYNLLQLHRRCLQTVEEIEVEQVKSNSNMDYLQLSNTRLKDQLELSKRENTGLLERERQ
LQLKVKSLHNCLKNEKEEVQKLQSIIASRATQYNHDMKRKEREFGKLKERLNQLLIDKKD
KKQTFEVLNYVGRSDGKRSLWKTGKTEARHEGEMYKTLLNDYDSRHKDLLMENAELKKVL
QQMKRDMVTILRPRKPSQSGEKHDDSLEQTSSEEDEVCDSSRESLELSCEHAREQLTNSI
RQQWRRLKSHVERLDSQASLVGERANMNAIPKEVHEEEMDRLKLEIQQYKDFIHTQQQLL
QQQLNSPCDDETASLLNDCYMQEEKERLKEDWKSFEEKRKNFEAERKNFTEAAIRLSHER
KAFEEDRATWLKHQFLNLTPFGDQMKPQMSKSQSALSGCAESEVRPMSTPAKLNKSLSHT
AFSTSRASPAKTPSTADLYRTHCLIPEKSPSTIHPKQDSSILRNGDVPAQLRHVNGGANC
RAYTFTGDRNGSI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacaacatctaaagactatactggagcaatagagcatttgttcatgtttttggat
gccccggaactccagaatgaggctgaggatgtcaattgctggtgggaaatcaaggacact
tcctgcagctcttcaagatacagaatctcttctctgaggcagtacagccaatcatcagtg
ctccctctgccaatgaccagaaacccctacaccatgcctacaataagtgccttctgtaca
gaggacaatgtgtcagaatgtatctcatacatcaatcaggaggtatcctctctgggcttt
ccattgctttgcacagagtctaacaacggtcctgaactgaatctggtggccgtgctgaat
aacgtgtacaacctgctccagctgcaccgccggtgcctgcagacagtggaggagattgaa
gtggagcaggtcaagtccaacagcaacatggactatctgcagctcagcaacactagactg
aaggatcaacttgaactctccaagagggaaaacactggacttcttgagagagaacgtcag
ctacagctgaaagtgaagagcttacataactgcctgaaaaatgaaaaagaagaggtacag
aaacttcaaagcatcatagcaagccgtgccactcagtacaatcatgacatgaagaggaaa
gaaagggagttcggcaaactaaaagagcgcctgaatcagcttctgatcgacaaaaaggat
aagaaacaaacgtttgaagtattgaactacgtgggaagatcggatgggaagagaagcctt
tggaaaactgggaagactgaggccagacatgagggagagatgtataagactctactgaac
gactacgacagtcgccacaaggacctattgatggagaacgcagagttaaagaaagtatta
cagcagatgaaaagggatatggtcaccattttgagacccaggaaacctagccaaagtggc
gagaaacatgatgacagtctagaacagaccagctcagaagaggatgaggtgtgtgattca
agtagagagagcctggagctgtcctgtgagcatgcaagggaacagctcaccaatagcatt
cgccagcagtggaggagactaaagagccacgtggagagactggacagccaagcatccttg
gtaggggagagagccaacatgaacgccatccccaaagaggtccatgaagaggagatggac
aggctgaaactggagatccagcagtataaagacttcatccacacgcagcagcagctcctg
cagcagcagctgaactccccatgtgacgatgagacagcctcgctgctcaacgactgttac
atgcaggaggagaaggagcgcctcaaggaggattggaagtccttcgaagaaaaaaggaag
aactttgaggcggaaaggaagaacttcacagaggcagccataagactgagccacgagaga
aaagcatttgaggaggaccgcgccacatggctcaaacatcagtttttaaacttgactcca
tttggagaccaaatgaaaccacagatgtcaaagtctcaaagtgccttatcaggatgtgct
gagtcagaggttaggcccatgtcgactccagcaaagttaaataaatcactatcccacacg
gctttctccacatccagagcctctccagcgaagacgccatccacggcagatctgtatcgc
acacactgccttatcccagaaaaaagcccaagcacaatccacccaaagcaagactccagc
atccttcgcaatggtgacgttcctgcccagctccgacacgtgaatggaggagcaaattgc
agagcatacacattcacgggagatagaaatggctccatttaa
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